RNA–Protein interactions for RNA: ENST00000550069.1

PFDN5-209, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-209ENST00000550069 TRA2BP62995 288 aaKnown RBP5.05□□□□□ -1.6
PFDN5-209ENST00000550069 HERVK_113P63132 956 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 GALK2Q01415 458 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 IRF8Q02556 426 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 SLC18A2Q05940 514 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 SRSF4Q08170 494 aaKnown RBP5.05□□□□□ -1.6
PFDN5-209ENST00000550069 COTL1Q14019 142 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 TSNQ15631 228 aaKnown RBP5.05□□□□□ -1.6
PFDN5-209ENST00000550069 GRAMD1BQ3KR37 738 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 SFT2D3Q587I9 215 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 TEX30Q5JUR7 227 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 FAM182AQ5T1J6 154 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 PXDC1Q5TGL8 231 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 GRHL2Q6ISB3 625 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 CGB2Q6NT52 195 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 JMJD6Q6NYC1 403 aaPredicted RBP5.05□□□□□ -1.6
PFDN5-209ENST00000550069 MED27Q6P2C8 311 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 TRIM40Q6P9F5 258 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 CYP20A1Q6UW02 462 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 TMEM207Q6UWW9 146 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 CLEC9AQ6UXN8 241 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 PLEKHM3Q6ZWE6 761 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 PAGE2Q7Z2X7 111 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 IGFN1Q86VF2 1251 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 CCDC36Q8IYA8 594 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 CENPLQ8N0S6 344 aaPredicted RBP5.05□□□□□ -1.6
PFDN5-209ENST00000550069 TAGAPQ8N103 731 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 DPP10Q8N608 796 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 CSNK1A1LQ8N752 337 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 NKAIN3Q8N8D7 197 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 PNLDC1Q8NA58 520 aaKnown RBP5.05□□□□□ -1.6
PFDN5-209ENST00000550069 PLPP5Q8NEB5 264 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 SEMA6DQ8NFY4 1073 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 OR5T2Q8NGG2 359 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 OR5H6Q8NGV6 325 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 OR1L3Q8NH93 324 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 SLC13A3Q8WWT9 602 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 NEIL2Q969S2 332 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 PHF21AQ96BD5 680 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 L3HYPDHQ96EM0 354 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 CMTM7Q96FZ5 175 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 MED8Q96G25 268 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 GPR78Q96P69 363 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 SERINC2Q96SA4 455 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 SERPINI1Q99574 410 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 TBCDQ9BTW9 1192 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 CHID1Q9BWS9 393 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 ERVK-6Q9BXR3 956 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 YTHDF1Q9BYJ9 559 aaKnown RBP5.05□□□□□ -1.6
PFDN5-209ENST00000550069 SLC29A3Q9BZD2 475 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 WNT5BQ9H1J7 359 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 XKR8Q9H6D3 395 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 HHATLQ9HCP6 504 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 LYRM4Q9HD34 91 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 ACTR3BQ9P1U1 418 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 IFT80Q9P2H3 777 aaPredicted RBP5.05□□□□□ -1.6
PFDN5-209ENST00000550069 GALPQ9UBC7 116 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 SNX6Q9UNH7 406 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 RUVBL2Q9Y230 463 aaKnown RBP5.05□□□□□ -1.6
PFDN5-209ENST00000550069 SLC22A14Q9Y267 594 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 DTX4Q9Y2E6 619 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 MMACHCQ9Y4U1 282 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 ASB4Q9Y574 426 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 AP4B1Q9Y6B7 739 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 DMDP11532 3685 aa5.05□□□□□ -1.6
PFDN5-209ENST00000550069 IGF2RP11717 2491 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 SCN3AQ9NY46 2000 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 MED13Q9UHV7 2174 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 CACNA1GO43497 2377 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 LOC102723996A0A087X1L8 192 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 IGKV1-8A0A0C4DH67 115 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 LOC390937A0A1W2PQ73 354 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 HMX3A6NHT5 357 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 C12orf71A8MTZ7 269 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 SUPT3HB4E1H0 165 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 POC1B-GALNT4F8VUJ3 575 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 MKRN2OSH3BPM6 223 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 CDC7O00311 574 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 COPEO14579 308 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 CTSVO60911 334 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 CEACAM4O75871 244 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 CLDN9O95484 217 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 GUCA1CO95843 209 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 S100A9P06702 114 aaKnown RBP5.04□□□□□ -1.6
PFDN5-209ENST00000550069 SMIM10L1P0DMW3 83 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 RNH1P13489 461 aaKnown RBP5.04□□□□□ -1.6
PFDN5-209ENST00000550069 ALOX12P18054 663 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 RAB4AP20338 218 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 SAT1P21673 171 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 EEF1DP29692 281 aaKnown RBP5.04□□□□□ -1.6
PFDN5-209ENST00000550069 TLX1P31314 330 aaPredicted RBP5.04□□□□□ -1.6
PFDN5-209ENST00000550069 HPCAL1P37235 193 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 TXNL4AP83876 142 aaKnown RBP5.04□□□□□ -1.6
PFDN5-209ENST00000550069 HOXA4Q00056 320 aaPredicted RBP5.04□□□□□ -1.6
PFDN5-209ENST00000550069 BTKQ06187 659 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 AIMP2Q13155 320 aaKnown RBP5.04□□□□□ -1.6
PFDN5-209ENST00000550069 SERTAD2Q14140 314 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 FASTKQ14296 549 aaKnown RBP5.04□□□□□ -1.6
PFDN5-209ENST00000550069 ZIC1Q15915 447 aa5.04□□□□□ -1.6
PFDN5-209ENST00000550069 TMEM95Q3KNT9 176 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms