RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 EIF4E1BA6NMX2 242 aaKnown RBP19.18■□□□□ 0.66
VPS29-206ENST00000549578 B8ZZF3 427 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 FAAHO00519 579 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 GP1BBP13224 206 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 COPZ1P61923 177 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 FLOT2Q14254 428 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 TMEM44Q2T9K0 475 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 PRICKLE2Q7Z3G6 844 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 RANBP3LQ86VV4 465 aaPredicted RBP19.18■□□□□ 0.66
VPS29-206ENST00000549578 NEIL3Q8TAT5 605 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 GEMIN6Q8WXD5 167 aaKnown RBP19.18■□□□□ 0.66
VPS29-206ENST00000549578 TMEM234Q8WY98 164 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 ST8SIA1Q92185 356 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 MCHR1Q99705 422 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 EVA1AQ9H8M9 152 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 CTPS2Q9NRF8 586 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 PLSCR2Q9NRY7 297 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 ACER3Q9NUN7 267 aa19.18■□□□□ 0.66
VPS29-206ENST00000549578 SHANK1Q9Y566 2161 aa19.17■□□□□ 0.66
VPS29-206ENST00000549578 C7orf72A4D263 438 aa19.17■□□□□ 0.66
VPS29-206ENST00000549578 ERFP50548 548 aa19.17■□□□□ 0.66
VPS29-206ENST00000549578 GFRA1P56159 465 aa19.17■□□□□ 0.66
VPS29-206ENST00000549578 GLYR1Q49A26 553 aaPredicted RBP19.17■□□□□ 0.66
VPS29-206ENST00000549578 KRTCAP3Q53RY4 240 aa19.17■□□□□ 0.66
VPS29-206ENST00000549578 MTX3Q5HYI7 312 aa19.17■□□□□ 0.66
VPS29-206ENST00000549578 POMZP3Q6PJE2 187 aa19.17■□□□□ 0.66
VPS29-206ENST00000549578 GTPBP8Q8N3Z3 284 aaPredicted RBP19.17■□□□□ 0.66
VPS29-206ENST00000549578 PYURFQ96I23 114 aa19.17■□□□□ 0.66
VPS29-206ENST00000549578 PIGQQ9BRB3 760 aa19.17■□□□□ 0.66
VPS29-206ENST00000549578 SPRR3Q9UBC9 169 aa19.17■□□□□ 0.66
VPS29-206ENST00000549578 A0A1B0GTH9 108 aa19.16■□□□□ 0.66
VPS29-206ENST00000549578 ETV2O00321 342 aaPredicted RBP19.16■□□□□ 0.66
VPS29-206ENST00000549578 SUSD5O60279 629 aa19.16■□□□□ 0.66
VPS29-206ENST00000549578 HCN1O60741 890 aa19.16■□□□□ 0.66
VPS29-206ENST00000549578 NTN1O95631 604 aa19.16■□□□□ 0.66
VPS29-206ENST00000549578 ZNF17P17021 662 aa19.16■□□□□ 0.66
VPS29-206ENST00000549578 IL11P20809 199 aa19.16■□□□□ 0.66
VPS29-206ENST00000549578 PSMA4P25789 261 aaKnown RBP19.16■□□□□ 0.66
VPS29-206ENST00000549578 EIF1P41567 113 aaKnown RBP19.16■□□□□ 0.66
VPS29-206ENST00000549578 SLC1A3P43003 542 aa19.16■□□□□ 0.66
VPS29-206ENST00000549578 MERTKQ12866 999 aa19.16■□□□□ 0.66
VPS29-206ENST00000549578 SLC25A53Q5H9E4 307 aa19.16■□□□□ 0.66
VPS29-206ENST00000549578 WBP2NLQ6ICG8 309 aa19.16■□□□□ 0.66
VPS29-206ENST00000549578 DEF8Q6ZN54 512 aa19.16■□□□□ 0.66
VPS29-206ENST00000549578 PLEKHM3Q6ZWE6 761 aa19.16■□□□□ 0.66
VPS29-206ENST00000549578 TSPYL5Q86VY4 417 aaPredicted RBP19.16■□□□□ 0.66
VPS29-206ENST00000549578 GHDCQ8N2G8 530 aa19.16■□□□□ 0.66
VPS29-206ENST00000549578 MRGPRX4Q96LA9 322 aa19.16■□□□□ 0.66
VPS29-206ENST00000549578 ZNF559Q9BR84 538 aa19.16■□□□□ 0.66
VPS29-206ENST00000549578 TRIM15Q9C019 465 aa19.16■□□□□ 0.66
VPS29-206ENST00000549578 A0A1B0GVC2 190 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 CPSF4LA6NMK7 179 aaKnown RBP19.15■□□□□ 0.66
VPS29-206ENST00000549578 SEMA7AO75326 666 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 IFNW1P05000 195 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 KCNC4Q03721 635 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 OR1Q1Q15612 314 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 ENTPD8Q5MY95 495 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 DCST1Q5T197 706 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 C1orf146Q5VVC0 180 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 GRINAQ7Z429 371 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 FGD2Q7Z6J4 655 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 LSMEM1Q8N8F7 131 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 TRIM2Q9C040 744 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 AMBRA1Q9C0C7 1298 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 ZNF337Q9Y3M9 751 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 A0A1B0GWA3 101 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 H3BML4 177 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 EFNA2O43921 213 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 EDN3P14138 238 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 BMP7P18075 431 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 TACR3P29371 465 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 YAP1P46937 504 aaKnown RBP19.15■□□□□ 0.66
VPS29-206ENST00000549578 STARP49675 285 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 DLX5P56178 289 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 TLE1Q04724 770 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 ARHGAP11AQ6P4F7 1023 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 AAGABQ6PD74 315 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 GFRALQ6UXV0 394 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 SPATA24Q86W54 205 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 CHERPQ8IWX8 916 aaKnown RBP19.15■□□□□ 0.66
VPS29-206ENST00000549578 PHF10Q8WUB8 498 aaKnown RBP19.15■□□□□ 0.66
VPS29-206ENST00000549578 RELTQ969Z4 430 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 C3orf49Q96BT1 292 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 SEPHS2Q99611 448 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 UGT2B28Q9BY64 529 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 TMEM185BQ9H7F4 350 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 TMEM27Q9HBJ8 222 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 RPS6KB2Q9UBS0 482 aa19.15■□□□□ 0.66
VPS29-206ENST00000549578 AQP12BA6NM10 295 aa19.14■□□□□ 0.65
VPS29-206ENST00000549578 AQP7O14520 342 aa19.14■□□□□ 0.65
VPS29-206ENST00000549578 FMO6PO60774 539 aa19.14■□□□□ 0.65
VPS29-206ENST00000549578 CIB2O75838 187 aa19.14■□□□□ 0.65
VPS29-206ENST00000549578 SEMG1P04279 462 aa19.14■□□□□ 0.65
VPS29-206ENST00000549578 PEPDP12955 493 aa19.14■□□□□ 0.65
VPS29-206ENST00000549578 CHMP24386 653 aa19.14■□□□□ 0.65
VPS29-206ENST00000549578 ADH6P28332 368 aa19.14■□□□□ 0.65
VPS29-206ENST00000549578 GCKP35557 465 aa19.14■□□□□ 0.65
VPS29-206ENST00000549578 CRYZQ08257 329 aaKnown RBP19.14■□□□□ 0.65
VPS29-206ENST00000549578 TSEN54Q7Z6J9 526 aaKnown RBP19.14■□□□□ 0.65
VPS29-206ENST00000549578 AQP12AQ8IXF9 295 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms