RNA–Protein interactions for RNA: ENST00000548945.6

PTCH1-218, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 243 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-218ENST00000548945 CD8AP01732 235 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 SHBGP04278 402 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 UBL4AP11441 157 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 COX5AP20674 150 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 CDKN1AP38936 164 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 RASGEF1BQ0VAM2 473 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 TP53BP2Q13625 1128 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 CBFBQ13951 182 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 PPA1Q15181 289 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 NRF1Q16656 503 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 XKR7Q5GH72 579 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 ARL13AQ5H913 290 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-218ENST00000548945 PODNL1Q6PEZ8 512 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 BHLHB9Q6PI77 547 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 HIPK1Q86Z02 1210 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 DDIASQ8IXT1 998 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 ZNF619Q8N2I2 560 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 GOLGA6L1Q8N7Z2 621 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 MAPK1IP1LQ8NDC0 245 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 ST8SIA1Q92185 356 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 NEUROG1Q92886 237 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 HS6ST2Q96MM7 605 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 PRPF18Q99633 342 aaKnown RBP11.38□□□□□ -0.59
PTCH1-218ENST00000548945 REPIN1Q9BWE0 567 aaKnown RBP11.38□□□□□ -0.59
PTCH1-218ENST00000548945 C12orf65Q9H3J6 166 aaKnown RBP11.38□□□□□ -0.59
PTCH1-218ENST00000548945 EML4Q9HC35 981 aaKnown RBP11.38□□□□□ -0.59
PTCH1-218ENST00000548945 MKS1Q9NXB0 559 aa11.38□□□□□ -0.59
PTCH1-218ENST00000548945 CISD1Q9NZ45 108 aaKnown RBP11.38□□□□□ -0.59
PTCH1-218ENST00000548945 NPIPA5A0A0B4J1W7 369 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 DUXAA6NLW8 204 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 SHISA9B4DS77 424 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 NPIPA7E9PJI5 369 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 PIP5K1BO14986 540 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 SMAD9O15198 467 aaKnown RBP11.37□□□□□ -0.59
PTCH1-218ENST00000548945 LYZL6O75951 148 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 AK1P00568 194 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 NPIPA8P0DM63 369 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 GGT1P19440 569 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 PRPS1L1P21108 318 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 PDK3Q15120 406 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 QPRTQ15274 297 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 SPDYE7PQ495Y7 208 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 HSP90B2PQ58FF3 399 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 CEP85LQ5SZL2 805 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 GALNT5Q7Z7M9 940 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 ATG4DQ86TL0 474 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-218ENST00000548945 ATP6V1C2Q8NEY4 427 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 OIT3Q8WWZ8 545 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 ZNF75CPQ92670 426 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-218ENST00000548945 OR7D2Q96RA2 312 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 SDF2Q99470 211 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 TMEM109Q9BVC6 243 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 ROPN1BQ9BZX4 212 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-218ENST00000548945 LAT2Q9GZY6 243 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 ROPN1Q9HAT0 212 aaPredicted RBP11.37□□□□□ -0.59
PTCH1-218ENST00000548945 MED4Q9NPJ6 270 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 EMC3Q9P0I2 261 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 MGAT4BQ9UQ53 548 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 KCNE3Q9Y6H6 103 aa11.37□□□□□ -0.59
PTCH1-218ENST00000548945 IGKV3D-15A0A087WSY6 115 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 IGHV3-15A0A0B4J1V0 119 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 A0A1W2PNR3 127 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 SERINC4A6NH21 518 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 OR5H1A6NKK0 313 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 TMEM233B4DJY2 109 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 ADAM11O75078 769 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 PEX11AO75192 247 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 C6orf47O95873 294 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 CHRNGP07510 517 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 MYZAPP0CAP1 466 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 SERPINB5P36952 375 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 CDH11P55287 796 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 C21orf58P58505 322 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 CSNK2A1P68400 391 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-218ENST00000548945 FAPQ12884 760 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 SKP2Q13309 424 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 PTGR1Q14914 329 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 STK11Q15831 433 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 ZNF141Q15928 474 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 NDUFAF6Q330K2 333 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 TIGD2Q4W5G0 525 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 ATP6AP1LQ52LC2 224 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 C6orf136Q5SQH8 315 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 PDZK1Q5T2W1 519 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 AGAP6Q5VW22 663 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 HMBOX1Q6NT76 420 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 RIMKLAQ8IXN7 391 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 ZNF100Q8IYN0 542 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 C4orf33Q8N1A6 199 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 TMCO5AQ8N6Q1 288 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 ZNF614Q8N883 585 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 OR2W6PQ8NHA6 318 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 SLC25A43Q8WUT9 341 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-218ENST00000548945 TMEM234Q8WY98 164 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 ZNF524Q96C55 264 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 OR5B2Q96R09 309 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 RHNO1Q9BSD3 238 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 BHLHE41Q9C0J9 482 aaPredicted RBP11.36□□□□□ -0.59
PTCH1-218ENST00000548945 SERINC1Q9NRX5 453 aa11.36□□□□□ -0.59
PTCH1-218ENST00000548945 PRSS50Q9UI38 385 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms