RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 FUT5Q11128 374 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 ARHGAP11BQ3KRB8 267 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 KRT71Q3SY84 523 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 TIGD2Q4W5G0 525 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 ATG4DQ86TL0 474 aaPredicted RBP15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 ANKRD46Q86W74 232 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 ZNF619Q8N2I2 560 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 MREGQ8N565 214 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 FAM71CQ8NEG0 241 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 OR4A15Q8NGL6 344 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 ST8SIA1Q92185 356 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 AKAP1Q92667 903 aaKnown RBP eCLIP15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 KISS1RQ969F8 398 aaPredicted RBP15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 SORT1Q99523 831 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 THUMPD3Q9BV44 507 aaKnown RBP15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 HDHD5Q9BXW7 423 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 POTEKPQ9BYX7 375 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 C20orf27Q9GZN8 174 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 OR51I1Q9H343 314 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 CXorf56Q9H5V9 222 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 KLHL9Q9P2J3 617 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 MKLN1Q9UL63 735 aa15.44■□□□□ 0.06
CHMP1A-205ENST00000548650 WDR91A4D1P6 747 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 ANKRD28O15084 1053 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 CYTIPO60759 359 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 BCAS1O75363 584 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 ADAP00813 363 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 CSTAP01040 98 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 UBTFL6P0CB48 400 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 EDNRAP25101 427 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 OR3A2P47893 321 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 CASP9P55211 416 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 PHC1P78364 1004 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 P2RY6Q15077 328 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 MAPK14Q16539 360 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 NCMAPQ5T1S8 102 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 ALKBH2Q6NS38 261 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 ADAM5Q6NVV9 412 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 C16orf62Q7Z3J2 963 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 LILRB1Q8NHL6 650 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 TESCQ96BS2 214 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 OR5B2Q96R09 309 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 ZNF300Q96RE9 604 aaPredicted RBP15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 SSU72Q9NP77 194 aaKnown RBP15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 HAO1Q9UJM8 370 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 RAP2CQ9Y3L5 183 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 RNF115Q9Y4L5 304 aa15.43■□□□□ 0.06
CHMP1A-205ENST00000548650 DNHD1Q96M86 4753 aa15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 BIRC5O15392 142 aa15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 CYP7B1O75881 506 aa15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 CNOT4O95628 575 aaKnown RBP15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 MYZAPP0CAP1 466 aa15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 PGM1P36871 562 aa15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 SESN3P58005 492 aa15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 PLAURQ03405 335 aa15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 ITGADQ13349 1161 aa15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 SAXO2Q658L1 398 aa15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 ABLIM2Q6H8Q1 611 aa15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 TYW3Q6IPR3 259 aaKnown RBP15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 TNFAIP8L2Q6P589 184 aaPredicted RBP15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 Q6ZT83 130 aa15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 DPY30Q9C005 99 aa15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 EXD2Q9NVH0 621 aa15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 PRSS50Q9UI38 385 aa15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 V9GYY5 206 aaPredicted RBP15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 PLCE1Q9P212 2302 aa15.42■□□□□ 0.06
CHMP1A-205ENST00000548650 TM9SF1O15321 606 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 CLOCKO15516 846 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 FESP07332 822 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 GUSBP08236 651 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 OR12D1P0DN82 309 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 PGCP20142 388 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 COX5AP20674 150 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 UQCRC2P22695 453 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 DIO1P49895 249 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 ATP5J2P56134 94 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 RPS4XP62701 263 aaKnown RBP15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 RASGEF1BQ0VAM2 473 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 MERTKQ12866 999 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 SYT14P1Q58G82 188 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 SPANXN4Q5MJ08 99 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 FRRS1Q6ZNA5 592 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 EIF3MQ7L2H7 374 aaKnown RBP15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 BHLHA15Q7RTS1 189 aaPredicted RBP15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 OIT3Q8WWZ8 545 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 TMEM234Q8WY98 164 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 HSD17B8Q92506 261 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 ZNF75CPQ92670 426 aaPredicted RBP15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 RAB8BQ92930 207 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 SAP130Q9H0E3 1048 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 ESRP2Q9H6T0 727 aaKnown RBP15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 POLE3Q9NRF9 147 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 ACER3Q9NUN7 267 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 PCDHGB4Q9UN71 923 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 WDR45Q9Y484 360 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 CR1P17927 2039 aa15.41■□□□□ 0.06
CHMP1A-205ENST00000548650 PRSS51A0A1B0GVH4 220 aa15.4■□□□□ 0.06
CHMP1A-205ENST00000548650 ZNF724A8MTY0 619 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms