RNA–Protein interactions for RNA: ENST00000547825.5

LIMA1-203, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-203ENST00000547825 CACNG2Q9Y698 323 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 TRIOBPQ9H2D6 2365 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 MROH6A6NGR9 719 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 EEF1E1-BLOC1S5C9J1V9 151 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 BLOC1S5-TXNDC5H3BN57 136 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 TXNL1O43396 289 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 COCHO43405 550 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 PI15O43692 258 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 CREBL2O60519 120 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 CSO75390 466 aaKnown RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF821O75541 412 aaPredicted RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ARL6IP5O75915 188 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 CBR1P16152 277 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 CD9P21926 228 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 PCMT1P22061 227 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ACRV1P26436 265 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 MAT2AP31153 395 aaKnown RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 CCR7P32248 378 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 GRK5P34947 590 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 RPS5P46782 204 aaKnown RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 GALK2Q01415 458 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 NNATQ16517 81 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 DUSP6Q16828 381 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 PRAMEF14Q5SWL7 426 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 SLC8B1Q6J4K2 584 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 TPRG1Q6ZUI0 275 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 SERPINA11Q86U17 422 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF527Q8NB42 609 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 GPR26Q8NDV2 337 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF740Q8NDX6 193 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF680Q8NEM1 530 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 GIMAP1Q8WWP7 306 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 RNF31Q96EP0 1072 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 S100A16Q96FQ6 103 aaKnown RBP5.11□□□□□ -1.59
LIMA1-203ENST00000547825 SAMD8Q96LT4 415 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 UROC1Q96N76 676 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF285Q96NJ3 590 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 DDOQ99489 341 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 MGME1Q9BQP7 344 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 EFCAB11Q9BUY7 163 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 SYNDIG1Q9H7V2 258 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 SH2B3Q9UQQ2 575 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 ERVK-19Q9WJR5 959 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 RCE1Q9Y256 329 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 FREM2Q5SZK8 3169 aa5.11□□□□□ -1.59
LIMA1-203ENST00000547825 FRYLO94915 3013 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 SVILO95425 2214 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 TRBV2A0A0J9YWF9 115 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 GTPBP1O00178 669 aaKnown RBP5.1□□□□□ -1.59
LIMA1-203ENST00000547825 LATO43561 262 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 ADAP00813 363 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 RLN2P04090 185 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 MAS1P04201 325 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 PCCBP05166 539 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 CSF3P09919 207 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 GSTM3P21266 225 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 PSMB10P40306 273 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 ARFIP1P53367 373 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 IFITM2Q01629 132 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 FADDQ13158 208 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 INSL4Q14641 139 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 SYPL1Q16563 259 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 COL28A1Q2UY09 1125 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 TP53I3Q53FA7 332 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 KLHL26Q53HC5 615 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 FAM46CQ5VWP2 391 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 MEDAGQ5VYS4 303 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 ARMC6Q6NXE6 501 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 METTL2BQ6P1Q9 378 aaKnown RBP5.1□□□□□ -1.59
LIMA1-203ENST00000547825 PODNL1Q6PEZ8 512 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 SBSNQ6UWP8 590 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 FAM124AQ86V42 546 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 OOSP2Q86WS3 158 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 TMPRSS12Q86WS5 348 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 ZFP82Q8N141 532 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 SLC44A3Q8N4M1 653 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 JAGN1Q8N5M9 183 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 COX18Q8N8Q8 333 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 PROKR2Q8NFJ6 384 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 THEM6Q8WUY1 208 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 FCAMRQ8WWV6 532 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 C3orf49Q96BT1 292 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 NLGN3Q9NZ94 848 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 EXOSC1Q9Y3B2 195 aaKnown RBP5.1□□□□□ -1.59
LIMA1-203ENST00000547825 NAALAD2Q9Y3Q0 740 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 F8W036 122 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 FAAHO00519 579 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 GRM6O15303 877 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 RGS11O94810 467 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 RPN2P04844 631 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 ACP5P13686 325 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF8P17098 575 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-203ENST00000547825 CLCNKAP51800 687 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 ZNF140P52738 457 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-203ENST00000547825 UBE2MP61081 183 aaKnown RBP5.1□□□□□ -1.59
LIMA1-203ENST00000547825 TBPL1P62380 186 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 BLOC1S1P78537 153 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 CDC20Q12834 499 aa5.1□□□□□ -1.59
LIMA1-203ENST00000547825 TMEM115Q12893 351 aaPredicted RBP5.1□□□□□ -1.59
LIMA1-203ENST00000547825 VEZF1Q14119 521 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms