RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 DNAJB1P25685 340 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 CCND2P30279 289 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 EPHX2P34913 555 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 DLSTP36957 453 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 CCR6P51684 374 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 ZNF136P52737 540 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 HSF2Q03933 536 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 RAB40BQ12829 278 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 ARFRP1Q13795 201 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 LAGE3Q14657 143 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 NSDHLQ15738 373 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 LY6EQ16553 131 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 DNAJC21Q5F1R6 531 aaKnown RBP2.14□□□□□ -2.07
CCDC38-204ENST00000546816 TOR1AIP1Q5JTV8 583 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 PAGE3Q5JUK9 113 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 NIPAL3Q6P499 406 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 PLBD1Q6P4A8 553 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 TMEM17Q86X19 198 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 VRK2Q86Y07 508 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 NRMQ8IXM6 262 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 TMEM61Q8N0U2 210 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 SVOPLQ8N434 492 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 ZNF740Q8NDX6 193 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 HPDLQ96IR7 371 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 VPS35Q96QK1 796 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 PLA2G2FQ9BZM2 168 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 SMYD3Q9H7B4 428 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 UTP6Q9NYH9 597 aaKnown RBP2.14□□□□□ -2.07
CCDC38-204ENST00000546816 ATXN10Q9UBB4 475 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 ANAPC7Q9UJX3 599 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 PRPF19Q9UMS4 504 aaKnown RBP2.14□□□□□ -2.07
CCDC38-204ENST00000546816 MGAT4BQ9UQ53 548 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 OARD1Q9Y530 152 aa2.14□□□□□ -2.07
CCDC38-204ENST00000546816 A0A1W2PNV4 684 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 TRIM64A6NGJ6 449 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 TRIM64BA6NI03 449 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 GJE1A6NN92 205 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 SERPINE3A8MV23 424 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 CLDN5O00501 218 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 HCN1O60741 890 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 ADRB3P13945 408 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 CYLC1P35663 651 aaPredicted RBP2.13□□□□□ -2.07
CCDC38-204ENST00000546816 MTTPP55157 894 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 MAP2K1Q02750 393 aaPredicted RBP2.13□□□□□ -2.07
CCDC38-204ENST00000546816 CCDC173Q0VFZ6 552 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 RABGAP1LQ5R372 815 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 RAET1GQ6H3X3 334 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 IGFL1Q6UW32 110 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 GDPD3Q7L5L3 318 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 C16orf62Q7Z3J2 963 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 MISPQ8IVT2 679 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 FAM9BQ8IZU0 186 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 DEDD2Q8WXF8 326 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 CCDC47Q96A33 483 aaKnown RBP2.13□□□□□ -2.07
CCDC38-204ENST00000546816 CELF6Q96J87 481 aaKnown RBP2.13□□□□□ -2.07
CCDC38-204ENST00000546816 AKR1E2Q96JD6 320 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 NAT10Q9H0A0 1025 aaKnown RBP2.13□□□□□ -2.07
CCDC38-204ENST00000546816 SLC25A22Q9H936 323 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 PLGRKTQ9HBL7 147 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 AGPAT5Q9NUQ2 364 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 NUFIP1Q9UHK0 495 aaKnown RBP2.13□□□□□ -2.07
CCDC38-204ENST00000546816 ANGPTL2Q9UKU9 493 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 NUDCQ9Y266 331 aa2.13□□□□□ -2.07
CCDC38-204ENST00000546816 PPIAL4CA0A0B4J2A2 164 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 IGHV3-64DA0A0J9YX35 117 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 FAM74A7A6NL05 159 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 E7ESA3 106 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 PES1O00541 588 aaKnown RBP2.12□□□□□ -2.07
CCDC38-204ENST00000546816 JAK2O60674 1132 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 ZNF780AO75290 641 aaPredicted RBP2.12□□□□□ -2.07
CCDC38-204ENST00000546816 SEC22BO75396 215 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 VPS26AO75436 327 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 UFL1O94874 794 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 SLITRK3O94933 977 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 MT-ND3P03897 115 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 PPIAL4GP0DN37 164 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 TBPP20226 339 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 PAICSP22234 425 aaKnown RBP2.12□□□□□ -2.07
CCDC38-204ENST00000546816 YBEYP58557 167 aaPredicted RBP2.12□□□□□ -2.07
CCDC38-204ENST00000546816 SPP2Q13103 211 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 ARL6IP1Q15041 203 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 TIGITQ495A1 244 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 LINC01620Q4KN68 170 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 FAM74A3Q4VXF1 159 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 GPR157Q5UAW9 335 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 C1orf146Q5VVC0 180 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 C11orf71Q6IPW1 123 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 LHFPL4Q7Z7J7 247 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 NKAPP1Q8N9T2 125 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 TCTEX1D2Q8WW35 142 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 MYLPFQ96A32 169 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 RPUSD4Q96CM3 377 aaKnown RBP2.12□□□□□ -2.07
CCDC38-204ENST00000546816 TESK2Q96S53 571 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 CYP2S1Q96SQ9 504 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 SELENOIQ9C0D9 397 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 POLR2J2Q9GZM3 115 aaKnown RBP2.12□□□□□ -2.07
CCDC38-204ENST00000546816 POLR2J3Q9H1A7 115 aaKnown RBP2.12□□□□□ -2.07
CCDC38-204ENST00000546816 RSPH9Q9H1X1 276 aaPredicted RBP2.12□□□□□ -2.07
CCDC38-204ENST00000546816 TBX21Q9UL17 535 aa2.12□□□□□ -2.07
CCDC38-204ENST00000546816 UGT2A1Q9Y4X1 527 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms