RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 PRRG4Q9BZD6 226 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 DMRT3Q9NQL9 472 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 CSNK1G3Q9Y6M4 447 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 RNF215Q9Y6U7 377 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 OR6C6A6NF89 314 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 CPEP16870 476 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 RAB4AP20338 218 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 CDK3Q00526 305 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 KIAA0319Q5VV43 1072 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 LCTLQ6UWM7 567 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 WDR88Q6ZMY6 472 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 ASPGQ86U10 573 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 MRPL41Q8IXM3 137 aaKnown RBP12.01□□□□□ -0.49
PTCH1-212ENST00000546744 KCT2Q8NC54 265 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 WDR20Q8TBZ3 569 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 DUSP19Q8WTR2 217 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 ZNF582Q96NG8 517 aaPredicted RBP12.01□□□□□ -0.49
PTCH1-212ENST00000546744 MBOAT4Q96T53 435 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 NDRG2Q9UN36 371 aaKnown RBP12.01□□□□□ -0.49
PTCH1-212ENST00000546744 MOKQ9UQ07 419 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 FOCADQ5VW36 1801 aa12.01□□□□□ -0.49
PTCH1-212ENST00000546744 A6NIZ1 184 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 CXCL14O95715 111 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 MGMTP16455 207 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 PRDX3P30048 256 aaKnown RBP12□□□□□ -0.49
PTCH1-212ENST00000546744 HOXD11P31277 338 aaPredicted RBP12□□□□□ -0.49
PTCH1-212ENST00000546744 PREPP48147 710 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 EVX1P49640 407 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 RAP1BP61224 184 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 RAP1AP62834 184 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 Q6ZSR9 355 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 Q6ZVL8 140 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 OR4K13Q8NH42 304 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 SLIRPQ9GZT3 109 aaKnown RBP12□□□□□ -0.49
PTCH1-212ENST00000546744 OR52A5Q9H2C5 316 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 SLC6A14Q9UN76 642 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 PCYT1BQ9Y5K3 369 aaPredicted RBP12□□□□□ -0.49
PTCH1-212ENST00000546744 TMEM212A6NML5 194 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 POM121CA8CG34 1229 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 GABRR3A8MPY1 467 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 TRIM77I1YAP6 450 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 SOX1O00570 391 aaPredicted RBP12□□□□□ -0.49
PTCH1-212ENST00000546744 PQBP1O60828 265 aaKnown RBP12□□□□□ -0.49
PTCH1-212ENST00000546744 UBL4AP11441 157 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 TLE4Q04727 773 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 RIN1Q13671 783 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 ZNF266Q14584 549 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 PUS10Q3MIT2 529 aaKnown RBP12□□□□□ -0.49
PTCH1-212ENST00000546744 LRFN4Q6PJG9 635 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 OVCH1Q7RTY7 1134 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 LAS2Q8IYD9 372 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 OR4Q3Q8NH05 313 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 SLC25A44Q96H78 314 aaPredicted RBP12□□□□□ -0.49
PTCH1-212ENST00000546744 LRFN5Q96NI6 719 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 OPA3Q9H6K4 179 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 FER1L6Q2WGJ9 1857 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 M0R3H8 397 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 AQP8O94778 261 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 CALCBP10092 127 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 TNFRSF1BP20333 461 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 GABRA3P34903 492 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 SPINT3P49223 89 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 RPL23AP62750 156 aaKnown RBP12□□□□□ -0.49
PTCH1-212ENST00000546744 ZNF805Q5CZA5 627 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 CCNJQ5T5M9 372 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 RBMS3Q6XE24 437 aaKnown RBP12□□□□□ -0.49
PTCH1-212ENST00000546744 CMTM1Q8IZ96 169 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 OR6N1Q8NGY5 312 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 LMF2Q9BU23 707 aaKnown RBP12□□□□□ -0.49
PTCH1-212ENST00000546744 TRAF4Q9BUZ4 470 aaPredicted RBP12□□□□□ -0.49
PTCH1-212ENST00000546744 RNF39Q9H2S5 420 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 IL21RQ9HBE5 538 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 SLAMF8Q9P0V8 285 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 TESQ9UGI8 421 aaKnown RBP12□□□□□ -0.49
PTCH1-212ENST00000546744 A0A087WZY1 265 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 A0A0D9SEW6 157 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 HMX2A2RU54 273 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 ANTXRLA6NF34 631 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 SLC9B1P1A6NJY1 282 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 GALP22466 123 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 OPRD1P41143 372 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 SGSHP51688 502 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 TAS2R30P59541 319 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 SSBP1Q04837 148 aaKnown RBP12□□□□□ -0.49
PTCH1-212ENST00000546744 TPBGQ13641 420 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 KIAA0141Q14154 515 aaPredicted RBP12□□□□□ -0.49
PTCH1-212ENST00000546744 ODF4Q2M2E3 257 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 OR2G6Q5TZ20 316 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 LEG1Q6P5S2 330 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 ACOT7LQ6ZUV0 252 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 ZNF551Q7Z340 670 aaPredicted RBP12□□□□□ -0.49
PTCH1-212ENST00000546744 RIMKLAQ8IXN7 391 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 RDH10Q8IZV5 341 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 ZBTB44Q8NCP5 570 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 OR14C36Q8NHC7 312 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 ST7LQ8TDW4 575 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 CREB3L4Q8TEY5 395 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 CMTM3Q96MX0 182 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 DDOQ99489 341 aa12□□□□□ -0.49
PTCH1-212ENST00000546744 TMEM100Q9NV29 134 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms