RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 H6PDO95479 791 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 ENO1P06733 434 aaKnown RBP11.16□□□□□ -0.62
SCAF11-208ENST00000546534 FOXG1P55316 489 aaPredicted RBP11.16□□□□□ -0.62
SCAF11-208ENST00000546534 SUMO3P55854 103 aaPredicted RBP11.16□□□□□ -0.62
SCAF11-208ENST00000546534 GNG11P61952 73 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 PHC1P78364 1004 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 SELENBP1Q13228 472 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 GABRA6Q16445 453 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 NDUFAF6Q330K2 333 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 LRIG3Q6UXM1 1119 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 MTERF4Q7Z6M4 381 aaKnown RBP11.16□□□□□ -0.62
SCAF11-208ENST00000546534 COX18Q8N8Q8 333 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 WDR31Q8NA23 367 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 CIDECQ96AQ7 238 aaPredicted RBP11.16□□□□□ -0.62
SCAF11-208ENST00000546534 MRGPRX4Q96LA9 322 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 MUS81Q96NY9 551 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 MS4A4EQ96PG1 132 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 OR5B2Q96R09 309 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 BPESC1Q9GZL8 116 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 ACSS3Q9H6R3 686 aa11.16□□□□□ -0.62
SCAF11-208ENST00000546534 TMEFF2Q9UIK5 374 aaPredicted RBP11.16□□□□□ -0.62
SCAF11-208ENST00000546534 WBP11Q9Y2W2 641 aaKnown RBP11.16□□□□□ -0.62
SCAF11-208ENST00000546534 UTP11Q9Y3A2 253 aaKnown RBP11.16□□□□□ -0.62
SCAF11-208ENST00000546534 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.16□□□□□ -0.62
SCAF11-208ENST00000546534 DYSFO75923 2080 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 NPIPA5A0A0B4J1W7 369 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 LRP5LA4QPB2 252 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 NPIPA7E9PJI5 369 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 ATP6V1G2-DDX39BF2Z307 99 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 PDPK1O15530 556 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 INHBAP08476 426 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 ALOX5P09917 674 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 NPIPA8P0DM63 369 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 SERPINB4P48594 390 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 FOXA1P55317 472 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 POU6F2P78424 691 aaPredicted RBP11.15□□□□□ -0.62
SCAF11-208ENST00000546534 KLHL26Q53HC5 615 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 SLC25A53Q5H9E4 307 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 EXOSC6Q5RKV6 272 aaKnown RBP11.15□□□□□ -0.62
SCAF11-208ENST00000546534 ANKRD26P1Q6NSI1 321 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 NOXRED1Q6NXP6 359 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 IKBIPQ70UQ0 350 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 ANKS4BQ8N8V4 417 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 SPATA4Q8NEY3 305 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 SGMS2Q8NHU3 365 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 BHLHE41Q9C0J9 482 aaPredicted RBP11.15□□□□□ -0.62
SCAF11-208ENST00000546534 ANKZF1Q9H8Y5 726 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 ASB6Q9NWX5 421 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 GIN1Q9NXP7 522 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 TAS2R16Q9NYV7 291 aa11.15□□□□□ -0.62
SCAF11-208ENST00000546534 IGKV3D-15A0A087WSY6 115 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 CCDC151A5D8V7 595 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 GTPBP1O00178 669 aaKnown RBP11.14□□□□□ -0.63
SCAF11-208ENST00000546534 TAC1P20366 129 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 IMPDH1P20839 514 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 IL2RGP31785 369 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 NTF4P34130 210 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 PHBP35232 272 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 PKNOX1P55347 436 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 SLC25A3Q00325 362 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 C2orf54Q08AI8 447 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 LCP2Q13094 533 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 MLC1Q15049 377 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 IMPG1Q17R60 797 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 ZNF385BQ569K4 471 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.14□□□□□ -0.63
SCAF11-208ENST00000546534 ABLIM2Q6H8Q1 611 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 ZNF527Q8NB42 609 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 RFWD2Q8NHY2 731 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 FAM76AQ8TAV0 307 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 JADE3Q92613 823 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 APH1AQ96BI3 265 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 ZMYND19Q96E35 227 aaPredicted RBP11.14□□□□□ -0.63
SCAF11-208ENST00000546534 VRK1Q99986 396 aaPredicted RBP11.14□□□□□ -0.63
SCAF11-208ENST00000546534 BTBD2Q9BX70 525 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 QRSL1Q9H0R6 528 aaKnown RBP11.14□□□□□ -0.63
SCAF11-208ENST00000546534 MYOZ1Q9NP98 299 aaPredicted RBP11.14□□□□□ -0.63
SCAF11-208ENST00000546534 NINJ2Q9NZG7 142 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 EMC3Q9P0I2 261 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 MALT1Q9UDY8 824 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 MOKQ9UQ07 419 aa11.14□□□□□ -0.63
SCAF11-208ENST00000546534 NOSIPQ9Y314 301 aaKnown RBP11.14□□□□□ -0.63
SCAF11-208ENST00000546534 ZNF716A6NP11 495 aa11.13□□□□□ -0.63
SCAF11-208ENST00000546534 TRIM49D1C9J1S8 452 aa11.13□□□□□ -0.63
SCAF11-208ENST00000546534 H3BNH8 94 aa11.13□□□□□ -0.63
SCAF11-208ENST00000546534 ETV2O00321 342 aaPredicted RBP11.13□□□□□ -0.63
SCAF11-208ENST00000546534 HSPA4LO95757 839 aa11.13□□□□□ -0.63
SCAF11-208ENST00000546534 ITGA5P08648 1049 aa11.13□□□□□ -0.63
SCAF11-208ENST00000546534 DIO1P49895 249 aa11.13□□□□□ -0.63
SCAF11-208ENST00000546534 SERPINB9P50453 376 aa11.13□□□□□ -0.63
SCAF11-208ENST00000546534 PDK3Q15120 406 aa11.13□□□□□ -0.63
SCAF11-208ENST00000546534 QPRTQ15274 297 aa11.13□□□□□ -0.63
SCAF11-208ENST00000546534 ZSWIM7Q19AV6 140 aa11.13□□□□□ -0.63
SCAF11-208ENST00000546534 C9orf135Q5VTT2 229 aa11.13□□□□□ -0.63
SCAF11-208ENST00000546534 OR7E24Q6IFN5 339 aa11.13□□□□□ -0.63
SCAF11-208ENST00000546534 C3orf33Q6P1S2 294 aa11.13□□□□□ -0.63
SCAF11-208ENST00000546534 ZCCHC12Q6PEW1 402 aa11.13□□□□□ -0.63
SCAF11-208ENST00000546534 TMPPEQ6ZT21 453 aa11.13□□□□□ -0.63
SCAF11-208ENST00000546534 SLC46A3Q7Z3Q1 461 aa11.13□□□□□ -0.63
SCAF11-208ENST00000546534 C3orf56Q8N813 242 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms