RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 RBM18Q96H35 190 aaKnown RBP6□□□□□ -1.45
SNHG1-225ENST00000545920 SENP5Q96HI0 755 aaPredicted RBP6□□□□□ -1.45
SNHG1-225ENST00000545920 FAM46AQ96IP4 442 aaKnown RBP6□□□□□ -1.45
SNHG1-225ENST00000545920 LCORQ96JN0 433 aaPredicted RBP6□□□□□ -1.45
SNHG1-225ENST00000545920 STACQ99469 402 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 ZNF559Q9BR84 538 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 UTP23Q9BRU9 249 aaKnown RBP6□□□□□ -1.45
SNHG1-225ENST00000545920 TMED9Q9BVK6 235 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 IFT27Q9BW83 186 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 HDHD5Q9BXW7 423 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 TEX101Q9BY14 249 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 ABCG4Q9H172 646 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 EGLN3Q9H6Z9 239 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 TBC1D17Q9HA65 648 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 MRPS30Q9NP92 439 aaKnown RBP6□□□□□ -1.45
SNHG1-225ENST00000545920 PRDM7Q9NQW5 492 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 TPSG1Q9NRR2 321 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 DUSP22Q9NRW4 184 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 SEMA4GQ9NTN9 838 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 TEX10Q9NXF1 929 aaPredicted RBP6□□□□□ -1.45
SNHG1-225ENST00000545920 OBP2AQ9NY56 170 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 GLTPQ9NZD2 209 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 DUX4Q9UBX2 424 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 UBQLN2Q9UHD9 624 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 FBXL3Q9UKT7 428 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 SPATA2Q9UM82 520 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 ZNF443Q9Y2A4 671 aaPredicted RBP6□□□□□ -1.45
SNHG1-225ENST00000545920 CLCA3PQ9Y6N3 262 aa6□□□□□ -1.45
SNHG1-225ENST00000545920 ALPK3Q96L96 1907 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 PCM1Q15154 2024 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 DOCK6Q96HP0 2047 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 OBSL1O75147 1896 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 A0A0A6YYJ9 748 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 A0A0G2JMP0 313 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 TEX13CA0A0J9YWL9 993 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 A0A1B0GUH1 482 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 ANTXRLA6NF34 631 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 IGLON5A6NGN9 336 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 HSPB2A8KAH6 182 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 SNRPGP15A8MWD9 76 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 FAM229AH3BQW9 127 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 H7BY64 318 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 RTCAO00442 366 aaKnown RBP5.99□□□□□ -1.45
SNHG1-225ENST00000545920 BTN3A3O00478 584 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 BHLHE40O14503 412 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 FABP7O15540 132 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 FLRT2O43155 660 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 PRICKLE3O43900 615 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-225ENST00000545920 RNGTTO60942 597 aaKnown RBP5.99□□□□□ -1.45
SNHG1-225ENST00000545920 MOSPD3O75425 235 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 RGS11O94810 467 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 CXCL14O95715 111 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 AIFM1O95831 613 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 IGF2P01344 180 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 IL5P05113 134 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 RHOP08100 348 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 HOXC4P09017 264 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-225ENST00000545920 UCHL1P09936 223 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 RAB40ALP0C0E4 278 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 H2AFB2P0C5Z0 115 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 OR2T7P0C7T2 308 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 POLR2CP19387 275 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-225ENST00000545920 RAB3BP20337 219 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 MAPK3P27361 379 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-225ENST00000545920 SLC6A6P31641 620 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 BMP8BP34820 402 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 TGM4P49221 684 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 MECP2P51608 486 aaKnown RBP5.99□□□□□ -1.45
SNHG1-225ENST00000545920 CLCNKAP51800 687 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 EEF1A1P68104 462 aaKnown RBP5.99□□□□□ -1.45
SNHG1-225ENST00000545920 RNF4P78317 190 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 CDK3Q00526 305 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 SNTA1Q13424 505 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 IL10RAQ13651 578 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 GGTLC2Q14390 218 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 TEAD2Q15562 447 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 HSPB2Q16082 182 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 UBE2NLQ5JXB2 153 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 SLC35D3Q5M8T2 416 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 WDR45BQ5MNZ6 344 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 MANEAQ5SRI9 462 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 IDNKQ5T6J7 187 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 MFSD12Q6NUT3 480 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 FRRS1Q6ZNA5 592 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 RTL4Q6ZR62 310 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.99□□□□□ -1.45
SNHG1-225ENST00000545920 SZRD1Q7Z422 152 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 WDR53Q7Z5U6 358 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-225ENST00000545920 BCDIN3DQ7Z5W3 292 aaKnown RBP5.99□□□□□ -1.45
SNHG1-225ENST00000545920 BMP8AQ7Z5Y6 402 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 KCTD20Q7Z5Y7 419 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 SLC51BQ86UW2 128 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 KLBQ86Z14 1044 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 GRAMD2AQ8IUY3 354 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 CPOQ8IVL8 374 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 NRMQ8IXM6 262 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 MMP21Q8N119 569 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 ZNF619Q8N2I2 560 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 OR2L13Q8N349 312 aa5.99□□□□□ -1.45
SNHG1-225ENST00000545920 LRRC25Q8N386 305 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms