RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 GLSO94925 669 aaPredicted RBP14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 GADD45GO95257 159 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 NTN1O95631 604 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 TNFRSF1BP20333 461 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 FPR1P21462 350 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 HTR2AP28223 471 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 IFNGR2P38484 337 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 IDH2P48735 452 aaKnown RBP14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 CLK1P49759 484 aaKnown RBP14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 POLR2HP52434 150 aaKnown RBP14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 QPRTQ15274 297 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 ALG10BQ5I7T1 473 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 GALNTL5Q7Z4T8 443 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 HIPK1Q86Z02 1210 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 SULF2Q8IWU5 870 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 GTPBP8Q8N3Z3 284 aaPredicted RBP14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 CATSPER1Q8NEC5 780 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 C9orf43Q8TAL5 461 aaPredicted RBP14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 SLC25A43Q8WUT9 341 aaPredicted RBP14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 DNAJC9Q8WXX5 260 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 C3orf49Q96BT1 292 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 SDCCAG3Q96C92 435 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 ABHD17AQ96GS6 310 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 SLC41A3Q96GZ6 507 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 ZNF426Q9BUY5 554 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 OR2B2Q9GZK3 357 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 DSN1Q9H410 356 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 ZNF703Q9H7S9 590 aaPredicted RBP14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 MED17Q9NVC6 651 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 TUBA8Q9NY65 449 aaPredicted RBP14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 STOML1Q9UBI4 398 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 TMCC3Q9ULS5 477 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 B3GNT3Q9Y2A9 372 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 LYVE1Q9Y5Y7 322 aa14.56□□□□□ -0.08
PRPF40A-212ENST00000545856 LRRC3CA6NJW4 275 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 CASQ2O14958 399 aaPredicted RBP14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 ZNF208O43345 1280 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 OIP5O43482 229 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 SEMA7AO75326 666 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 HPNP05981 417 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 PRG2P13727 222 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 PRKCAP17252 672 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 DPP4P27487 766 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 RRM2P31350 389 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 RYKP34925 604 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 GCKP35557 465 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 LIMS1P48059 325 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 DNASE1L1P49184 302 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 MEOX1P50221 254 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 SPIBQ01892 262 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 SLC34A1Q06495 639 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 PLPPR5Q32ZL2 321 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 RBM45Q8IUH3 476 aaKnown RBP14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 FAM109AQ8N4B1 249 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 ACOT11Q8WXI4 607 aaPredicted RBP14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 EXTL1Q92935 676 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 PNPLA2Q96AD5 504 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 TMEM43Q9BTV4 400 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 VCX3BQ9H321 246 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 DEPPQ9NTK1 212 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 DKKL1Q9UK85 242 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 ZMIZ1Q9ULJ6 1067 aa14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 SAMHD1Q9Y3Z3 626 aaKnown RBP14.55□□□□□ -0.08
PRPF40A-212ENST00000545856 FREM3P0C091 2139 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 A0A087WUJ7 227 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 CPSF4LA6NMK7 179 aaKnown RBP14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 ERVH48-1M5A8F1 160 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 TNFRSF11BO00300 401 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 GNB5O14775 395 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 FFAR1O14842 300 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 ADAM11O75078 769 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 E2F6O75461 281 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 ATP6V1G2O95670 118 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 ERFP50548 548 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 CDH12P55289 794 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 SESN3P58005 492 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 PIN1Q13526 163 aaPredicted RBP14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 TMEM44Q2T9K0 475 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 NDUFAF6Q330K2 333 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 DCST1Q5T197 706 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 SHQ1Q6PI26 577 aaKnown RBP14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 LINC00114Q6XXX2 140 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 ASB18Q6ZVZ8 466 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 GDF7Q7Z4P5 450 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 ATG4DQ86TL0 474 aaPredicted RBP14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 ZDHHC13Q8IUH4 622 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 CADM2Q8N3J6 435 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 OR5K1Q8NHB7 308 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 LRTOMTQ8WZ04 291 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 WFDC6Q9BQY6 131 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 PIGQQ9BRB3 760 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 C9orf16Q9BUW7 83 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 TTTY12Q9BZ98 90 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 GABARAPL1Q9H0R8 117 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 ACKR4Q9NPB9 350 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 SERINC1Q9NRX5 453 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 MED11Q9P086 117 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 TMEM5Q9Y2B1 443 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 ZZEF1O43149 2961 aa14.54□□□□□ -0.08
PRPF40A-212ENST00000545856 ELOA3DA6NLF2 546 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms