RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 NR0B2Q15466 257 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 MANEAQ5SRI9 462 aa11.71□□□□□ -0.53
COL4A6-209ENST00000545689 MAOAP21397 527 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 SLC6A11P48066 632 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 TAS2R19P59542 299 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 SNRPGP62308 76 aaKnown RBP11.71□□□□□ -0.54
COL4A6-209ENST00000545689 HBMQ6B0K9 141 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 BEND4Q6ZU67 534 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 PHYHIPQ92561 330 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 ARL11Q969Q4 196 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 ARRDC3Q96B67 414 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 TMEM168Q9H0V1 697 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 RAB9BQ9NP90 201 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 CA14Q9ULX7 337 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 ARHGAP33O14559 1287 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 LDB3O75112 727 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 BPNT1O95861 308 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 IGLV3-25P01717 112 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 TMEM225BP0DP42 221 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 ARNTP27540 789 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 PSMB5P28074 263 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 ATAD3CQ5T2N8 411 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 KDM4DQ6B0I6 523 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 HMBOX1Q6NT76 420 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 USP53Q70EK8 1073 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 RAB11FIP2Q7L804 512 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 ZNF582Q96NG8 517 aaPredicted RBP11.71□□□□□ -0.54
COL4A6-209ENST00000545689 DUSP23Q9BVJ7 150 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 SYNPO2LQ9H987 977 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 OR2S2Q9NQN1 319 aa11.71□□□□□ -0.54
COL4A6-209ENST00000545689 DRD5P21918 477 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 VEGFBP49765 207 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 HSF5Q4G112 596 aaPredicted RBP11.7□□□□□ -0.54
COL4A6-209ENST00000545689 FAM71E1Q6IPT2 247 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 CMIPQ8IY22 773 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 ENTHD1Q8IYW4 607 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 ELP4Q96EB1 424 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 ZNF160Q9HCG1 818 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 PARPBPQ9NWS1 579 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 ZNF175Q9Y473 711 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 NPR2P20594 1047 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 PFN3P60673 137 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 SGPP2Q8IWX5 399 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 EIF5A2Q9GZV4 153 aaKnown RBP11.7□□□□□ -0.54
COL4A6-209ENST00000545689 OR10A5Q9H207 317 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 OR10A2Q9H208 303 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 KLHL13Q9P2N7 655 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 MYO5AQ9Y4I1 1855 aaKnown RBP11.7□□□□□ -0.54
COL4A6-209ENST00000545689 ARPC1BO15143 372 aaKnown RBP11.7□□□□□ -0.54
COL4A6-209ENST00000545689 OR2T7P0C7T2 308 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 EMP2P54851 167 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 RIN1Q13671 783 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 SLX4IPQ5VYV7 408 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 GALNT6Q8NCL4 622 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 OR51L1Q8NGJ5 315 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 OR2T27Q8NH04 317 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 OR14L1PQ8NHC6 308 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 TM4SF18Q96CE8 201 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 SORCS2Q96PQ0 1159 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 PAPPAQ13219 1627 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 TNRC6CQ9HCJ0 1690 aaKnown RBP11.7□□□□□ -0.54
COL4A6-209ENST00000545689 TRAV27A0A087WT01 109 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 SLC9B1P1A6NJY1 282 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 CRTAPO75718 401 aaPredicted RBP11.7□□□□□ -0.54
COL4A6-209ENST00000545689 PIPP12273 146 aaPredicted RBP11.7□□□□□ -0.54
COL4A6-209ENST00000545689 FPR3P25089 353 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 DLX5P56178 289 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 MRPL2Q5T653 305 aaKnown RBP11.7□□□□□ -0.54
COL4A6-209ENST00000545689 AGAP7PQ5VUJ5 663 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 CYP4V2Q6ZWL3 525 aaPredicted RBP11.7□□□□□ -0.54
COL4A6-209ENST00000545689 MAFIPQ8WZ33 124 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 LYSMD1Q96S90 227 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 SULT4A1Q9BR01 284 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 PGAP2Q9UHJ9 254 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 CR2P20023 1033 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 ELAVL4P26378 380 aaKnown RBP11.7□□□□□ -0.54
COL4A6-209ENST00000545689 FOLR3P41439 243 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 SLC1A3P43003 542 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 CAMLGP49069 296 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 NKX2-5P52952 324 aaPredicted RBP11.7□□□□□ -0.54
COL4A6-209ENST00000545689 EXOSC7Q15024 291 aaKnown RBP11.7□□□□□ -0.54
COL4A6-209ENST00000545689 ACTBL2Q562R1 376 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 ELMOD3Q96FG2 381 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 CRB3Q9BUF7 120 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 DNTTIP1Q9H147 329 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 KCMF1Q9P0J7 381 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 POLHQ9Y253 713 aa11.7□□□□□ -0.54
COL4A6-209ENST00000545689 LOC102725191A0A1B0GVB3 256 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 CIB4A0PJX0 185 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 GAPDHSO14556 408 aaPredicted RBP11.69□□□□□ -0.54
COL4A6-209ENST00000545689 KLK8O60259 260 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 HTR1FP30939 366 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 GJA4P35212 333 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 SLC26A5P58743 744 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 SIMC1Q8NDZ2 872 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 PSD2Q9BQI7 771 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 CXCL16Q9H2A7 254 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 NPIPA5A0A0B4J1W7 369 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 B8ZZF3 427 aa11.69□□□□□ -0.54
COL4A6-209ENST00000545689 NPIPA7E9PJI5 369 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms