RNA–Protein interactions for RNA: ENST00000545228.2

TSEN54-203, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-203ENST00000545228 MED17Q9NVC6 651 aa12.56□□□□□ -0.4
TSEN54-203ENST00000545228 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.56□□□□□ -0.4
TSEN54-203ENST00000545228 ACTR3BQ9P1U1 418 aa12.56□□□□□ -0.4
TSEN54-203ENST00000545228 CD300AQ9UGN4 299 aa12.56□□□□□ -0.4
TSEN54-203ENST00000545228 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 CENPVL1A0A0U1RR11 272 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 GMFGO60234 142 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 ZNF682O95780 498 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 LGI1O95970 557 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 FESP07332 822 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 GABRA1P14867 456 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 RPS3AP61247 264 aaKnown RBP12.55□□□□□ -0.4
TSEN54-203ENST00000545228 TRAP1Q12931 704 aaKnown RBP12.55□□□□□ -0.4
TSEN54-203ENST00000545228 TRIM25Q14258 630 aaKnown RBP12.55□□□□□ -0.4
TSEN54-203ENST00000545228 QPRTQ15274 297 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 BCL2A1Q16548 175 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 FXNQ16595 210 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 CYBRD1Q53TN4 286 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 SLC25A53Q5H9E4 307 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 WIPI1Q5MNZ9 446 aaPredicted RBP12.55□□□□□ -0.4
TSEN54-203ENST00000545228 CBLN3Q6UW01 205 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 C5orf46Q6UWT4 87 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 FKBP9P1Q75LS8 142 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 CHMP1BQ7LBR1 199 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 YTHDF3Q7Z739 585 aaKnown RBP12.55□□□□□ -0.4
TSEN54-203ENST00000545228 CYP4Z1Q86W10 505 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 RNF148Q8N7C7 305 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 SMYD1Q8NB12 490 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 GPR119Q8TDV5 335 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 DNAJA4Q8WW22 397 aaPredicted RBP12.55□□□□□ -0.4
TSEN54-203ENST00000545228 CNOT9Q92600 299 aaKnown RBP12.55□□□□□ -0.4
TSEN54-203ENST00000545228 ABTB1Q969K4 478 aaPredicted RBP12.55□□□□□ -0.4
TSEN54-203ENST00000545228 TAMM41Q96BW9 452 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 TPD52L3Q96J77 140 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 RTN4RQ9BZR6 473 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 LRMDAQ9H2I8 198 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 C12orf10Q9HB07 376 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 ACER3Q9NUN7 267 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 EGFL7Q9UHF1 273 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 ACAD8Q9UKU7 415 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 NTNG1Q9Y2I2 539 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 AP4B1Q9Y6B7 739 aa12.55□□□□□ -0.4
TSEN54-203ENST00000545228 UTP20O75691 2785 aaKnown RBP12.54□□□□□ -0.4
TSEN54-203ENST00000545228 ETV2O00321 342 aaPredicted RBP12.54□□□□□ -0.4
TSEN54-203ENST00000545228 ADAM10O14672 748 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 ARPC2O15144 300 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 WDR1O75083 606 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 SERPINA1P01009 418 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 OPN1SWP03999 348 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 PRKCAP17252 672 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 ITGA2P17301 1181 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 POU3F2P20265 443 aaPredicted RBP12.54□□□□□ -0.4
TSEN54-203ENST00000545228 CD247P20963 164 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 MST1P26927 711 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 RYKP34925 604 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 SLC1A3P43003 542 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 POLR2HP52434 150 aaKnown RBP12.54□□□□□ -0.4
TSEN54-203ENST00000545228 DMTNQ08495 405 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 IFI44LQ53G44 452 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 RNFT1Q5M7Z0 435 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 SWT1Q5T5J6 900 aaKnown RBP12.54□□□□□ -0.4
TSEN54-203ENST00000545228 CBLL1Q75N03 491 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 YRDCQ86U90 279 aaKnown RBP12.54□□□□□ -0.4
TSEN54-203ENST00000545228 DHFR2Q86XF0 187 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 LSMEM1Q8N8F7 131 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 FBXO27Q8NI29 283 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 SLC7A6OSQ96CW6 309 aaPredicted RBP12.54□□□□□ -0.4
TSEN54-203ENST00000545228 TSPAN10Q9H1Z9 355 aaPredicted RBP12.54□□□□□ -0.4
TSEN54-203ENST00000545228 SLC6A15Q9H2J7 730 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 TIGARQ9NQ88 270 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 RLIMQ9NVW2 624 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 RPH3AQ9Y2J0 694 aaPredicted RBP12.54□□□□□ -0.4
TSEN54-203ENST00000545228 TEX15Q9BXT5 2789 aa12.54□□□□□ -0.4
TSEN54-203ENST00000545228 A0A1B0GTH9 108 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 OR2M5A3KFT3 312 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 CLDN24A6NM45 220 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 ZIC3O60481 467 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 CIB2O75838 187 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 IFNW1P05000 195 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 PNMTP11086 282 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 CXCR1P25024 350 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 SLC7A1P30825 629 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 IDH2P48735 452 aaKnown RBP12.53□□□□□ -0.4
TSEN54-203ENST00000545228 CLK1P49759 484 aaKnown RBP12.53□□□□□ -0.4
TSEN54-203ENST00000545228 GFRA1P56159 465 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 DLX5P56178 289 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 RAC1P63000 192 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 MERTKQ12866 999 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 CEACAM7Q14002 265 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 NRF1Q16656 503 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 DUSP7Q16829 419 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 NDUFAF6Q330K2 333 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 MTFR2Q6P444 385 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 ZNF613Q6PF04 617 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 ULK3Q6PHR2 472 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 ARSKQ6UWY0 536 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 HMGN2P46Q86SG4 172 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 C10orf67Q8IYJ2 551 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 CADM2Q8N3J6 435 aa12.53□□□□□ -0.4
TSEN54-203ENST00000545228 DDIT4LQ96D03 193 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms