RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 TESQ9UGI8 421 aaKnown RBP13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SAMD4AQ9UPU9 718 aaKnown RBP13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 V9GYQ6 96 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ZFYVE26Q68DK2 2539 aa13.1□□□□□ -0.31
TNFRSF1A-216ENST00000543995 C7orf72A4D263 438 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 OR14I1A6ND48 311 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 LINC01387J3KSC0 135 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 FAAHO00519 579 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ACTL6AO96019 429 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TPOP07202 933 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 POU3F2P20265 443 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 CHMP24386 653 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 HTR3AP46098 478 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 OR1E2P47887 323 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 B3GALT5-AS1P59052 145 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 MERTKQ12866 999 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 NRF1Q16656 503 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 WLSQ5T9L3 541 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 VASNQ6EMK4 673 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 WBP2NLQ6ICG8 309 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ENPP6Q6UWR7 440 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GRINAQ7Z429 371 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 VTCN1Q7Z7D3 282 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 CARM1Q86X55 608 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ZGRF1Q86YA3 2104 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 LACC1Q8IV20 430 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ULK2Q8IYT8 1036 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 EID3Q8N140 333 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ATP6V1C2Q8NEY4 427 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 OR6T1Q8NGN1 323 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 POC1BQ8TC44 478 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SMPDL3BQ92485 455 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ASB9Q96DX5 294 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 HSH2DQ96JZ2 352 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 LRGUKQ96M69 825 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 WFDC6Q9BQY6 131 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ZNF559Q9BR84 538 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ACER3Q9NUN7 267 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 STOML1Q9UBI4 398 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ZNF337Q9Y3M9 751 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GTF3C1Q12789 2109 aa13.09□□□□□ -0.31
TNFRSF1A-216ENST00000543995 BCKDKO14874 412 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TACR3P29371 465 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SLC1A3P43003 542 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 STARP49675 285 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ZNF136P52737 540 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 MS4A2Q01362 244 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SRYQ05066 204 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 CRYZQ08257 329 aaKnown RBP13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 MRPL49Q13405 166 aaKnown RBP13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TMEM44Q2T9K0 475 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 IFI44LQ53G44 452 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SLC25A53Q5H9E4 307 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 NHSL2Q5HYW2 709 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 DEF8Q6ZN54 512 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 PLEKHM3Q6ZWE6 761 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 FGD2Q7Z6J4 655 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 UBQLNLQ8IYU4 475 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 GALNT11Q8NCW6 608 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 OR4D11Q8NGI4 311 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 MCHR1Q99705 422 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TIMP4Q99727 224 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 PRR14Q9BWN1 585 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TRIM2Q9C040 744 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 MMADHCQ9H3L0 296 aaPredicted RBP13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TMEM185BQ9H7F4 350 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 TMEM27Q9HBJ8 222 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 SERINC1Q9NRX5 453 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 ALKBH4Q9NXW9 302 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 CAMK2AQ9UQM7 478 aa13.08□□□□□ -0.31
TNFRSF1A-216ENST00000543995 CPSF4LA6NMK7 179 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TMEM229AB2RXF0 380 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PRRG2O14669 202 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SLC19A2O60779 497 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 WISP1O95388 367 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PEPDP12955 493 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ATP6V1B2P21281 511 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PSMA4P25789 261 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 HTR2AP28223 471 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ELK4P28324 431 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 APOBEC1P41238 236 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 POLR2HP52434 150 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 OR1Q1Q15612 314 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 DCST1Q5T197 706 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PGM2L1Q6PCE3 622 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 RBM45Q8IUH3 476 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 LILRA2Q8N149 483 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 OR5M9Q8NGP3 310 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 FAM57AQ8TBR7 257 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 RNF217Q8TC41 542 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 GEMIN6Q8WXD5 167 aaKnown RBP13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 RELTQ969Z4 430 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 TRIM15Q9C019 465 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 CTPS2Q9NRF8 586 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 SELENONQ9NZV5 590 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 PRDM4Q9UKN5 801 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 AP4B1Q9Y6B7 739 aa13.08□□□□□ -0.32
TNFRSF1A-216ENST00000543995 MED12Q93074 2177 aa13.07□□□□□ -0.32
TNFRSF1A-216ENST00000543995 ETV2O00321 342 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms