RNA–Protein interactions for RNA: ENST00000543537.5

COPS7A-217, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-217ENST00000543537 NECTIN3Q9NQS3 549 aa10.54□□□□□ -0.72
COPS7A-217ENST00000543537 PLCXD1Q9NUJ7 323 aa10.54□□□□□ -0.72
COPS7A-217ENST00000543537 IMPAD1Q9NX62 359 aa10.54□□□□□ -0.72
COPS7A-217ENST00000543537 MKLN1Q9UL63 735 aa10.54□□□□□ -0.72
COPS7A-217ENST00000543537 MKL2Q9ULH7 1088 aa10.54□□□□□ -0.72
COPS7A-217ENST00000543537 ERVK-19Q9WJR5 959 aa10.54□□□□□ -0.72
COPS7A-217ENST00000543537 SNX5Q9Y5X3 404 aa10.54□□□□□ -0.72
COPS7A-217ENST00000543537 A0A1W2PQD3 144 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 E9PQ18 207 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 ZNF701M0R085 212 aaPredicted RBP10.53□□□□□ -0.72
COPS7A-217ENST00000543537 SCDO00767 359 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 ALOX12BO75342 701 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 CT62P0C5K7 136 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 ATXN8OSP0DMR3 200 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 CT45A8P0DMV1 189 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 CT45A9P0DMV2 189 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 MAOAP21397 527 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 GGT2P36268 569 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 TMED10P49755 219 aaKnown RBP10.53□□□□□ -0.72
COPS7A-217ENST00000543537 CRISP1P54107 249 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 MYBPC1Q00872 1141 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 IL5RAQ01344 420 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 TSPAN31Q12999 210 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 ZNF169Q14929 603 aaPredicted RBP10.53□□□□□ -0.72
COPS7A-217ENST00000543537 EXOSC7Q15024 291 aaKnown RBP10.53□□□□□ -0.72
COPS7A-217ENST00000543537 ZIK1Q3SY52 487 aaPredicted RBP10.53□□□□□ -0.72
COPS7A-217ENST00000543537 ANKDD1AQ495B1 522 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 CT45A2Q5DJT8 189 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 ZNF770Q6IQ21 691 aaPredicted RBP10.53□□□□□ -0.72
COPS7A-217ENST00000543537 CASP12Q6UXS9 341 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 TMEM179BQ7Z7N9 219 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 PRSS58Q8IYP2 241 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 CISD2Q8N5K1 135 aaKnown RBP10.53□□□□□ -0.72
COPS7A-217ENST00000543537 SLC15A4Q8N697 577 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 AQP11Q8NBQ7 271 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 SLC2A12Q8TD20 617 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 MYDGFQ969H8 173 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 C8orf44Q96CB5 159 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 MBOAT4Q96T53 435 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 SLC19A3Q9BZV2 496 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 VN1R1Q9GZP7 353 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 ZNF160Q9HCG1 818 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 PNO1Q9NRX1 252 aaKnown RBP10.53□□□□□ -0.72
COPS7A-217ENST00000543537 ASF1BQ9NVP2 202 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 LUZP4Q9P127 313 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 RPS6KB2Q9UBS0 482 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 NTNG1Q9Y2I2 539 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 PCDHGB1Q9Y5G3 927 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 CLDN16Q9Y5I7 305 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 CSAG2Q9Y5P2 127 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 KCNE3Q9Y6H6 103 aa10.53□□□□□ -0.72
COPS7A-217ENST00000543537 CYSRT1A8MQ03 144 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 NPIPB9F8W1W9 429 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 CDK2AP1O14519 115 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 FFAR1O14842 300 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 EIF4E2O60573 245 aaKnown RBP10.52□□□□□ -0.73
COPS7A-217ENST00000543537 PPM1BO75688 479 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 SMNDC1O75940 238 aaKnown RBP eCLIP10.52□□□□□ -0.73
COPS7A-217ENST00000543537 DIRAS1O95057 198 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 DDAH2O95865 285 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 HMGN1P05114 100 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 PNMTP11086 282 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 TBXA2RP21731 343 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 EEF1B2P24534 225 aaKnown RBP10.52□□□□□ -0.73
COPS7A-217ENST00000543537 FPR3P25089 353 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 SOX18P35713 384 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 GPR143P51810 404 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 MAP2K6P52564 334 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 SMSP52788 366 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 IL1RL1Q01638 556 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 PIN1Q13526 163 aaPredicted RBP10.52□□□□□ -0.73
COPS7A-217ENST00000543537 APOFQ13790 326 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 FGFBP1Q14512 234 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 INAQ16352 499 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 SYT16Q17RD7 645 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 SLC25A30Q5SVS4 291 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 PLAG1Q6DJT9 500 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 H3F3CQ6NXT2 135 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 ULK3Q6PHR2 472 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 ZNF773Q6PK81 442 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 ZNF730Q6ZMV8 503 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 MBOAT2Q6ZWT7 520 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 VRK2Q86Y07 508 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 CYP4Z2PQ8N1L4 340 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 ST6GALNAC3Q8NDV1 305 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 B3GNT7Q8NFL0 401 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 OR4K5Q8NGD3 323 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 OR8J1Q8NGP2 316 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 OR52J3Q8NH60 311 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 VANGL1Q8TAA9 524 aaPredicted RBP10.52□□□□□ -0.73
COPS7A-217ENST00000543537 SLC7A13Q8TCU3 470 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 FCGR1BQ92637 280 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 DIO2Q92813 273 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 DTNBP1Q96EV8 351 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 VMP1Q96GC9 406 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 SLC41A3Q96GZ6 507 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 SLC38A2Q96QD8 506 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 FUZQ9BT04 418 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 MED17Q9NVC6 651 aa10.52□□□□□ -0.73
COPS7A-217ENST00000543537 CLN6Q9NWW5 311 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms