RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 SLCO2B1O94956 709 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 DDAH2O95865 285 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 TNFRSF1BP20333 461 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 CNR2P34972 360 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 PCGF2P35227 344 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 MECP2P51608 486 aaKnown RBP6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 PPP2CBP62714 309 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 SELENOWP63302 87 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 PPP2CAP67775 309 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 KCNJ10P78508 379 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 FOXC1Q12948 553 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 EXT1Q16394 746 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 BCL2L15Q5TBC7 163 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 PRAMEF17Q5VTA0 474 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 PLBD1Q6P4A8 553 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 SLCO4C1Q6ZQN7 724 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 SYT14Q8NB59 555 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC7A6OSQ96CW6 309 aaPredicted RBP6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 GIMAP5Q96F15 307 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 EGLN2Q96KS0 407 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF701Q9NV72 531 aaPredicted RBP6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 PRAMEF33A0A0G2JMD5 474 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 METTL12A8MUP2 240 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 PPP6CO00743 305 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 PRAMEF10O60809 474 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 PPP1R3DO95685 299 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 HPRP00739 348 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 F10P00742 488 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 ITGB8P26012 769 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 PKLRP30613 574 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 FASLGP48023 281 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 NKX3-2P78367 333 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 DYRK1AQ13627 763 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC22A10Q63ZE4 541 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 FAM109BQ6ICB4 259 aaPredicted RBP6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 WBP2NLQ6ICG8 309 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 MTFR2Q6P444 385 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 HS3ST5Q8IZT8 346 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 LILRA3Q8N6C8 439 aaPredicted RBP6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 TRMT10AQ8TBZ6 339 aaKnown RBP6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 SLC2A12Q8TD20 617 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 OR7D2Q96RA2 312 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 KCNJ15Q99712 375 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 HCAR1Q9BXC0 346 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF442Q9H7R0 627 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 PARPBPQ9NWS1 579 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 A0A1B0GUL6 1792 aa6.45□□□□□ -1.38
SRGAP1-206ENST00000543397 F5H5K5 113 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF264O43296 627 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 GPRIN2O60269 458 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 IGLV3-27P01718 113 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 PVALBP20472 110 aaPredicted RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 FRKP42685 505 aaPredicted RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 CDC34P49427 236 aaPredicted RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 CDH15P55291 814 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 ROR2Q01974 943 aaKnown RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 GGTA1PQ4G0N0 100 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 C3orf33Q6P1S2 294 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 TMPRSS12Q86WS5 348 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 LAS2Q8IYD9 372 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 RNF175Q8N4F7 328 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF740Q8NDX6 193 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 ANKK1Q8NFD2 765 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 OR13C3Q8NGS6 347 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 SGCZQ96LD1 299 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 CFHR5Q9BXR6 569 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 PRDM9Q9NQV7 894 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 INIPQ9NRY2 104 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 TMEM30AQ9NV96 361 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 USP36Q9P275 1121 aaKnown RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 TCRBV5S1A1TA0A578 114 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 G3V3Y1 287 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 CLPXO76031 633 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 SCGNO76038 276 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 CLIC3O95833 236 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 RETP07949 1114 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 C7P10643 843 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 RPA2P15927 270 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 MSX1P28360 303 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 SNU13P55769 128 aaKnown RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 TMEM176BQ3YBM2 270 aaPredicted RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 RPS19BP1Q86WX3 136 aaKnown RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 MISPQ8IVT2 679 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 SAMD8Q96LT4 415 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF578Q96N58 590 aaPredicted RBP6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 C1QTNF2Q9BXJ5 285 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 ULBP2Q9BZM5 246 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 OR10A5Q9H207 317 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 LRRN3Q9H3W5 708 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 ZNF160Q9HCG1 818 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 SMOXQ9NWM0 555 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 DNAJB11Q9UBS4 358 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 KCNS2Q9ULS6 477 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 RNF6Q9Y252 685 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 ADAM18Q9Y3Q7 739 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 THSD7AQ9UPZ6 1657 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 LOC100509620A0A075B734 347 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 A0A1W2PPW3 197 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 CBY3A6NI87 242 aa6.44□□□□□ -1.38
SRGAP1-206ENST00000543397 EEF1E1-BLOC1S5C9J1V9 151 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms