RNA–Protein interactions for RNA: ENST00000543016.1

DDX55-210, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-210ENST00000543016 PCDHAC1Q9H158 963 aa11.03□□□□□ -0.64
DDX55-210ENST00000543016 TMEM27Q9HBJ8 222 aa11.03□□□□□ -0.64
DDX55-210ENST00000543016 GMPR2Q9P2T1 348 aaKnown RBP11.03□□□□□ -0.64
DDX55-210ENST00000543016 VDAC3Q9Y277 283 aa11.03□□□□□ -0.64
DDX55-210ENST00000543016 HRH3Q9Y5N1 445 aa11.03□□□□□ -0.64
DDX55-210ENST00000543016 POLEQ07864 2286 aa11.03□□□□□ -0.64
DDX55-210ENST00000543016 A0A1B0GTH9 108 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 OR2M5A3KFT3 312 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 C17orf51A8MQB3 221 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 AP3D1O14617 1153 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 BCAS1O75363 584 aaPredicted RBP11.02□□□□□ -0.65
DDX55-210ENST00000543016 ZNF682O95780 498 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 EPPINO95925 133 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 PRB1P04280 392 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 GKN3PP0CG01 181 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 CPN1P15169 458 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 NCK1P16333 377 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 PSMA4P25789 261 aaKnown RBP11.02□□□□□ -0.65
DDX55-210ENST00000543016 RNF144AP50876 292 aaPredicted RBP11.02□□□□□ -0.65
DDX55-210ENST00000543016 POLR2HP52434 150 aaKnown RBP11.02□□□□□ -0.65
DDX55-210ENST00000543016 ZNF136P52737 540 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 CASP6P55212 293 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 RAC1P63000 192 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 SELENBP1Q13228 472 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 COLEC12Q5KU26 742 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 WLSQ5T9L3 541 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 ZNF613Q6PF04 617 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 ASRGL1Q7L266 308 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 SPPL2CQ8IUH8 684 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 ULK2Q8IYT8 1036 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 TPD52L3Q96J77 140 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 LRGUKQ96M69 825 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 ADAM19Q9H013 955 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 TSPAN10Q9H1Z9 355 aaPredicted RBP11.02□□□□□ -0.65
DDX55-210ENST00000543016 SLC6A15Q9H2J7 730 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 PAQR5Q9NXK6 330 aaPredicted RBP11.02□□□□□ -0.65
DDX55-210ENST00000543016 SELENONQ9NZV5 590 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 RPS6KB2Q9UBS0 482 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 PACSIN3Q9UKS6 424 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 RPH3AQ9Y2J0 694 aaPredicted RBP11.02□□□□□ -0.65
DDX55-210ENST00000543016 ZNF835Q9Y2P0 537 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 SH3GLB1Q9Y371 365 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 DNAJC13O75165 2243 aa11.02□□□□□ -0.65
DDX55-210ENST00000543016 ZNF407Q9C0G0 2248 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 AQP12BA6NM10 295 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 AHRRA9YTQ3 701 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 TMEM229AB2RXF0 380 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 PRRG2O14669 202 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 ZNF208O43345 1280 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 GMFGO60234 142 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 PDE5AO76074 875 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 IFNW1P05000 195 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 THRBP10828 461 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 PNMTP11086 282 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 UMPSP11172 480 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 GABRA1P14867 456 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 ABOP16442 354 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 ITGA2P17301 1181 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 BMP7P18075 431 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 FOXK1P85037 733 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 CRYZQ08257 329 aaKnown RBP11.01□□□□□ -0.65
DDX55-210ENST00000543016 MERTKQ12866 999 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 TOMM34Q15785 309 aaPredicted RBP11.01□□□□□ -0.65
DDX55-210ENST00000543016 GLIPR1L2Q4G1C9 344 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 PDSS1Q5T2R2 415 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 ULK3Q6PHR2 472 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 C5orf46Q6UWT4 87 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 Q6ZPB1 254 aaPredicted RBP11.01□□□□□ -0.65
DDX55-210ENST00000543016 PLEKHM3Q6ZWE6 761 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 FKBP9P1Q75LS8 142 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 ZNF605Q86T29 641 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 CARM1Q86X55 608 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 AQP12AQ8IXF9 295 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 MEIOBQ8N635 442 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 OR6T1Q8NGN1 323 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 FAM57AQ8TBR7 257 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 POC1BQ8TC44 478 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 SLC47A1Q96FL8 570 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 PYURFQ96I23 114 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 MCHR1Q99705 422 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 TIMP4Q99727 224 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 RSPO3Q9BXY4 272 aaPredicted RBP11.01□□□□□ -0.65
DDX55-210ENST00000543016 UGT2B28Q9BY64 529 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 PRDM14Q9GZV8 571 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 ACAD8Q9UKU7 415 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 LIPGQ9Y5X9 500 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 HEATR5AQ86XA9 2040 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 NBASA2RRP1 2371 aa11.01□□□□□ -0.65
DDX55-210ENST00000543016 FIGNL2A6NMB9 653 aa11□□□□□ -0.65
DDX55-210ENST00000543016 ACOT8O14734 319 aa11□□□□□ -0.65
DDX55-210ENST00000543016 SLC19A2O60779 497 aa11□□□□□ -0.65
DDX55-210ENST00000543016 ADAM11O75078 769 aa11□□□□□ -0.65
DDX55-210ENST00000543016 WDR1O75083 606 aa11□□□□□ -0.65
DDX55-210ENST00000543016 PRG2P13727 222 aa11□□□□□ -0.65
DDX55-210ENST00000543016 ZNF708P17019 499 aa11□□□□□ -0.65
DDX55-210ENST00000543016 POU3F2P20265 443 aaPredicted RBP11□□□□□ -0.65
DDX55-210ENST00000543016 MSX2P35548 267 aaPredicted RBP11□□□□□ -0.65
DDX55-210ENST00000543016 RPS3AP61247 264 aaKnown RBP11□□□□□ -0.65
DDX55-210ENST00000543016 MS4A2Q01362 244 aa11□□□□□ -0.65
DDX55-210ENST00000543016 FOXF1Q12946 379 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms