RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 ALKBH4Q9NXW9 302 aa15.44■□□□□ 0.06
RABGGTA-203ENST00000543002 STOML1Q9UBI4 398 aa15.44■□□□□ 0.06
RABGGTA-203ENST00000543002 SLC13A4Q9UKG4 626 aa15.44■□□□□ 0.06
RABGGTA-203ENST00000543002 SYT5O00445 386 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 CXCR6O00574 342 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 GSTA4O15217 222 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 FRS3O43559 492 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 EFNA2O43921 213 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 LGI1O95970 557 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 IFNA14P01570 189 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 HOXD4P09016 255 aaPredicted RBP15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 HSD17B1P14061 328 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 CD247P20963 164 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 ACVR2AP27037 513 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 HTR1EP28566 365 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 PTGER4P35408 488 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 RAC1P63000 192 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 KCNC4Q03721 635 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 SPATS1Q496A3 300 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 SAMD4BQ5PRF9 694 aaKnown RBP15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 PLEKHM3Q6ZWE6 761 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 GRINAQ7Z429 371 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 ULK2Q8IYT8 1036 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 EID3Q8N140 333 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 RNF148Q8N7C7 305 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 C1orf21Q9H246 121 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 CD300AQ9UGN4 299 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 PACSIN3Q9UKS6 424 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 SLC5A6Q9Y289 635 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 HELZ2Q9BYK8 2649 aaKnown RBP15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 HIVEP3Q5T1R4 2406 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 E9PLN8 166 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 CCL21O00585 134 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 LRRTM2O43300 516 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 IL11P20809 199 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 ME2P23368 584 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 APOBEC1P41238 236 aaKnown RBP15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 SLC1A3P43003 542 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 HTR3AP46098 478 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 ZNF136P52737 540 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 COPZ1P61923 177 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 SRYQ05066 204 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 MERTKQ12866 999 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 SF3B4Q15427 424 aaKnown RBP eCLIP15.43■□□□□ 0.062e-8■■■■■ 55.8
RABGGTA-203ENST00000543002 LRRC23Q53EV4 343 aaPredicted RBP15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 C3P1Q6ZMU1 363 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 FJX1Q86VR8 437 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 MEIOBQ8N635 442 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 ZPLD1Q8TCW7 415 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 SMPDL3BQ92485 455 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 FIG4Q92562 907 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 ARHGDIGQ99819 225 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 VKORC1Q9BQB6 163 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 TAS2R1Q9NYW7 299 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 MEMO1Q9Y316 297 aa15.43■□□□□ 0.06
RABGGTA-203ENST00000543002 FASNP49327 2511 aaKnown RBP15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 H0Y3Z8 333 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 FESP07332 822 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 GGT1P19440 569 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 SUCLG1P53597 346 aaKnown RBP15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 CLDN15P56746 228 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 CLDN20P56880 219 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 RGS8P57771 180 aaPredicted RBP15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 HOXC5Q00444 222 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 SELENBP1Q13228 472 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 NRF1Q16656 503 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 CYBRD1Q53TN4 286 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 C1orf185Q5T7R7 199 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 RTL6Q6ICC9 239 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 WBP2NLQ6ICG8 309 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 GGNQ86UU5 652 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 UBQLNLQ8IYU4 475 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 LILRA2Q8N149 483 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 ARHGAP24Q8N264 748 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 DMRTA2Q96SC8 542 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 TUBA1CQ9BQE3 449 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 ADAM19Q9H013 955 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 CTPS2Q9NRF8 586 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 SERINC1Q9NRX5 453 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 ERRFI1Q9UJM3 462 aaPredicted RBP15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 BAG5Q9UL15 447 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 FAM215AQ9Y5M1 114 aa15.42■□□□□ 0.06
RABGGTA-203ENST00000543002 TMEM229AB2RXF0 380 aa15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 H0YC42 278 aa15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 SEC14L5O43304 696 aa15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 SEMA7AO75326 666 aa15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 TACR3P29371 465 aa15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 POLR2HP52434 150 aaKnown RBP15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 TPD52P55327 224 aaPredicted RBP15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 CBX1P83916 185 aa15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 CEACAM7Q14002 265 aa15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 FXNQ16595 210 aa15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 ACSF3Q4G176 576 aaPredicted RBP15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 C3orf33Q6P1S2 294 aa15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 MTFR2Q6P444 385 aa15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 C6orf89Q6UWU4 347 aa15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 B3GNT6Q6ZMB0 384 aa15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 CADM2Q8N3J6 435 aa15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 LSMEM1Q8N8F7 131 aa15.41■□□□□ 0.06
RABGGTA-203ENST00000543002 FAM156AQ8NDB6 213 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms