RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 PRAF2O60831 178 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 KERAO60938 352 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 CREG1O75629 220 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 RP2O75695 350 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 GPX5O75715 221 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 STBD1O95210 358 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 TRUB2O95900 331 aaKnown RBP5.39□□□□□ -1.55
XRCC4-206ENST00000542685 PGK1P00558 417 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 ANXA5P08758 320 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 HIST1H2AGP0C0S8 130 aaPredicted RBP5.39□□□□□ -1.55
XRCC4-206ENST00000542685 SPP1P10451 314 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 ODC1P11926 461 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 UGT2B7P16662 529 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 HIST1H2ADP20671 130 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 UQCRC2P22695 453 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 IGFBP5P24593 272 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 MST1P26927 711 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 ARRB2P32121 409 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 SDC2P34741 201 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 BMI1P35226 326 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 CHRNA7P36544 502 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 MATKP42679 507 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 CDKN2AP42771 156 aaKnown RBP5.39□□□□□ -1.55
XRCC4-206ENST00000542685 LHX1P48742 406 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 SRP9P49458 86 aaKnown RBP5.39□□□□□ -1.55
XRCC4-206ENST00000542685 AGTR2P50052 363 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 RPP30P78346 268 aaKnown RBP5.39□□□□□ -1.55
XRCC4-206ENST00000542685 SREBF2Q12772 1141 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 DGCR6Q14129 220 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 GK2Q14410 553 aaPredicted RBP5.39□□□□□ -1.55
XRCC4-206ENST00000542685 PTGR1Q14914 329 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 MAD2L1BPQ15013 274 aaPredicted RBP5.39□□□□□ -1.55
XRCC4-206ENST00000542685 PGM5Q15124 567 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 LGALSLQ3ZCW2 172 aaPredicted RBP5.39□□□□□ -1.55
XRCC4-206ENST00000542685 CHRFAM7AQ494W8 412 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 VPS26BQ4G0F5 336 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 FAM74A3Q4VXF1 159 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 SLC39A12Q504Y0 691 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 AGKQ53H12 422 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 C10orf91Q5T1B1 145 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 HECTD3Q5T447 861 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 LIPNQ5VXI9 398 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 HIST2H2AA3Q6FI13 130 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 RAET1GQ6H3X3 334 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 FAM199XQ6PEV8 388 aaPredicted RBP5.39□□□□□ -1.55
XRCC4-206ENST00000542685 DHRS13Q6UX07 377 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 FAM131AQ6UXB0 335 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 ZNF534Q76KX8 674 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 TRMT11Q7Z4G4 463 aaKnown RBP5.39□□□□□ -1.55
XRCC4-206ENST00000542685 RBM23Q86U06 439 aaKnown RBP5.39□□□□□ -1.55
XRCC4-206ENST00000542685 IQCHQ86VS3 1027 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 C15orf54Q8N8G6 183 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 MFSD9Q8NBP5 474 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 DNAAF1Q8NEP3 725 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 HUS1BQ8NHY5 278 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 LPAR1Q92633 364 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 OSTF1Q92882 214 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 RHBDF1Q96CC6 855 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 SCRN2Q96FV2 425 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 FCRL1Q96LA6 429 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 PKP4Q99569 1192 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 C19orf43Q9BQ61 176 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 RTP3Q9BQQ7 232 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 PI4K2AQ9BTU6 479 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 CRB3Q9BUF7 120 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 ARHGAP39Q9C0H5 1083 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 ANKRA2Q9H9E1 313 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 CACYBPQ9HB71 228 aaKnown RBP5.39□□□□□ -1.55
XRCC4-206ENST00000542685 TMEM138Q9NPI0 162 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 DECR2Q9NUI1 292 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 PPIEQ9UNP9 301 aaKnown RBP5.39□□□□□ -1.55
XRCC4-206ENST00000542685 TMEM184BQ9Y519 407 aaPredicted RBP5.39□□□□□ -1.55
XRCC4-206ENST00000542685 PCDHA10Q9Y5I2 948 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 CDH10Q9Y6N8 788 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 PLXNA1Q9UIW2 1896 aa5.39□□□□□ -1.55
XRCC4-206ENST00000542685 LCTP09848 1927 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 COL4A4P53420 1690 aaPredicted RBP5.38□□□□□ -1.55
XRCC4-206ENST00000542685 TRBV5-3A0A0A0MS03 114 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 A0A1W2PRB8 838 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 LNP1A1A4G5 178 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 FABP12A6NFH5 140 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 GLTPD2A6NH11 291 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 DDTLA6NHG4 134 aaPredicted RBP5.38□□□□□ -1.55
XRCC4-206ENST00000542685 HMSDA8MTL9 139 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 TRDCB7Z8K6 153 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 WASH3PC4AMC7 463 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 E9PQ18 207 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 ZNF670-ZNF695F2Z2N8 137 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 M0QYV0 167 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 DFFAO00273 331 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 BCAT2O15382 392 aaPredicted RBP5.38□□□□□ -1.55
XRCC4-206ENST00000542685 KIAA0513O60268 411 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 FADS1O60427 444 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 TPST1O60507 370 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 DPM1O60762 260 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 RGS11O94810 467 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 OTCP00480 354 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 SERPINA3P01011 423 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 EGFP01133 1207 aa5.38□□□□□ -1.55
XRCC4-206ENST00000542685 GALTP07902 379 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms