RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 INPP5KQ9BT40 448 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 MIXL1Q9H2W2 232 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 FBRSQ9HAH7 460 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 FOLH1BQ9HBA9 442 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 SLC22A11Q9NSA0 550 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 RBFOX1Q9NWB1 397 aaKnown RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 SH3BP4Q9P0V3 963 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 C9orf170A2RU37 121 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 MAGEB17A8MXT2 336 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 C2CD4DB7Z1M9 353 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 C10orf142B7Z368 130 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 FMO6PO60774 539 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 FBXO24O75426 580 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 TOXO94900 526 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 PAK4O96013 591 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 TMIGD3P0DMS9 266 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 MUC1P15941 1255 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 GZMMP51124 257 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 RAC3P60763 192 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 PPP2CBP62714 309 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 PPP2CAP67775 309 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 PIN1Q13526 163 aaPredicted RBP7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 RIPPLY2Q5TAB7 128 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 BCL2L15Q5TBC7 163 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 DDI2Q5TDH0 399 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 LIPKQ5VXJ0 399 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 VASNQ6EMK4 673 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 FRMPD2BQ6IN97 320 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 RASSF6Q6ZTQ3 369 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 SYT14Q8NB59 555 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 OR5K2Q8NHB8 316 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.44□□□□□ -1.229e-15■■■□□ 17.6
PDLIM5-221ENST00000542407 CHTF18Q8WVB6 975 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 KLK6Q92876 244 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 APOLD1Q96LR9 279 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 IL17FQ96PD4 163 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 PITX2Q99697 317 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 SGK2Q9HBY8 427 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 PLSCR4Q9NRQ2 329 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 VPS29Q9UBQ0 182 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 PLAGL1Q9UM63 463 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 NCKAP1Q9Y2A7 1128 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 SLC17A4Q9Y2C5 497 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 NUBP2Q9Y5Y2 271 aa7.44□□□□□ -1.22
PDLIM5-221ENST00000542407 A0A1W2PQU0 124 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 XKRY2A2RUG3 117 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 ITGB1BP1O14713 200 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 HSPA12AO43301 675 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 SCN2BO60939 215 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 LRATO95237 230 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 CEACAM5P06731 702 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 ACSM4P0C7M7 580 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 RRASP10301 218 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 WNT3P56703 355 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 CAMK2DQ13557 499 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 SF1Q15637 639 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 C22orf42Q6IC83 251 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 RPUSD3Q6P087 351 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 CDC73Q6P1J9 531 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 USP30Q70CQ3 517 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 TRILQ7L0X0 811 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 TMPRSS11BQ86T26 416 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 DCUN1D3Q8IWE4 304 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 LRRC18Q8N456 261 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 OR11H4Q8NGC9 324 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 THRSPQ92748 146 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 SCARF2Q96GP6 870 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 SHDQ96IW2 340 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 TSSK3Q96PN8 268 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 DPH2Q9BQC3 489 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 EBPLQ9BY08 206 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 SLC17A9Q9BYT1 436 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 DOCK9Q9BZ29 2069 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 ANKRD19PQ9H560 264 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 SEPSECSQ9HD40 501 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 MYOZ1Q9NP98 299 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 RLIMQ9NVW2 624 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 ZNF226Q9NYT6 803 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 NDRG3Q9UGV2 375 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 CLEC2DQ9UHP7 191 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 SSR3Q9UNL2 185 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 PPIEQ9UNP9 301 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 TRPM6Q9BX84 2022 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 A0A1W2PPV9 198 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 FAM220BPB1ANY3 271 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 GTPBP1O00178 669 aaKnown RBP7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 LGALS8O00214 317 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 NXPH2O95156 264 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 CFDP00746 253 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 CRHP06850 196 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 TPOP07202 933 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 IGFBP1P08833 259 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 RD3LP0DJH9 198 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 C1GALT1C1LP0DN25 315 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 SAGP10523 405 aaPredicted RBP7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 NR2F1P10589 423 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 HOXB2P14652 356 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 SDHBP21912 280 aa7.43□□□□□ -1.22
PDLIM5-221ENST00000542407 MAGEA2P43356 314 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms