RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 FZD5Q13467 585 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 ARHGAP11BQ3KRB8 267 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 C3orf38Q5JPI3 329 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 FHL5Q5TD97 284 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 OR51L1Q8NGJ5 315 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 SLC25A46Q96AG3 418 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 DNAJA3Q96EY1 480 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 IL20Q9NYY1 176 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 KDM4EB2RXH2 506 aaPredicted RBP13.67□□□□□ -0.22
DDX55-209ENST00000542286 IMPA2O14732 288 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 KLF4O43474 513 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 IGHV4-34P06331 123 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 SDHBP21912 280 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 FPR3P25089 353 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 RAB40BQ12829 278 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 KLHL22Q53GT1 634 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 OR52R1Q8NGF1 315 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 ZNF649Q9BS31 505 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 TPSD1Q9BZJ3 242 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 MCUBQ9NWR8 336 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 PHF11Q9UIL8 331 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 MSRAQ9UJ68 235 aa13.67□□□□□ -0.22
DDX55-209ENST00000542286 FBXO9Q9UK97 447 aaPredicted RBP13.67□□□□□ -0.22
DDX55-209ENST00000542286 KCNJ13O60928 360 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 TRIM3O75382 744 aaPredicted RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 SEMA4FO95754 770 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 SAGP10523 405 aaPredicted RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 MAZP56270 477 aaKnown RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 RPS7P62081 194 aaKnown RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 DECR1Q16698 335 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 ZBTB37Q5TC79 503 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 VASNQ6EMK4 673 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 RPTNQ6XPR3 784 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 USP53Q70EK8 1073 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 RFLNBQ8N5W9 214 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 TOR1AIP2Q8NFQ8 470 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 SLC22A18Q96BI1 424 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 CDCA3Q99618 268 aaPredicted RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 CCDC3Q9BQI4 270 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 AIFM2Q9BRQ8 373 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 GPR174Q9BXC1 333 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 MEPEQ9NQ76 525 aaPredicted RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 C19orf53Q9UNZ5 99 aaPredicted RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 DUXAA6NLW8 204 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 E9PI62 339 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 TRIM77I1YAP6 450 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 I3L521 148 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 CASKO14936 926 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 TPPPO94811 219 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 IGKV1D-16P01601 117 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 APEX1P27695 318 aaKnown RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 NDUFS1P28331 727 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 IFNGR2P38484 337 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 TSFMP43897 325 aaKnown RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 MAP2K3P46734 347 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 MGAT2Q10469 447 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 P2RY14Q15391 338 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 PRICKLE4Q2TBC4 344 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 LCN1P1Q5VSP4 162 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 IL20RBQ6UXL0 311 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 GDPGP1Q6ZNW5 385 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 ABHD13Q7L211 337 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 CXXC5Q7LFL8 322 aaKnown RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 PARGQ86W56 976 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 TRIM69Q86WT6 500 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 MARCH9Q86YJ5 346 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 CA13Q8N1Q1 262 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 ARL14Q8N4G2 192 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 CAMKVQ8NCB2 501 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 ZNF485Q8NCK3 441 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 OR2T33Q8NG76 320 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 BAHD1Q8TBE0 780 aaPredicted RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 FANK1Q8TC84 345 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 UFD1Q92890 307 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 ARHGAP9Q9BRR9 750 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 ZNF350Q9GZX5 532 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 PPIL3Q9H2H8 161 aaKnown RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 SIDT1Q9NXL6 827 aaKnown RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 NLGN3Q9NZ94 848 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 CALML5Q9NZT1 146 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 PCOLCE2Q9UKZ9 415 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 MPDZO75970 2070 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 HPGDSO60760 199 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 APBB3O95704 486 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 NGFRP08138 427 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 ZNF250P15622 560 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 MAOBP27338 520 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 BTG2P78543 158 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 EIF2B5Q13144 721 aaKnown RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 MAB21L1Q13394 359 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 PLK5Q496M5 336 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 TMEM184AQ6ZMB5 413 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 DNAJA4Q8WW22 397 aaPredicted RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 TOE1Q96GM8 510 aaKnown RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 PEX11GQ96HA9 241 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 KCTD7Q96MP8 289 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 GFM1Q96RP9 751 aaKnown RBP13.66□□□□□ -0.22
DDX55-209ENST00000542286 LMF1Q96S06 567 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 PIGUQ9H490 435 aa13.66□□□□□ -0.22
DDX55-209ENST00000542286 FGF20Q9NP95 211 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms