RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 TNNI1P19237 187 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 FUT1P19526 365 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 PSMA5P28066 241 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 OXTRP30559 389 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 AKT2P31751 481 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 YWHABP31946 246 aaKnown RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 HMGCLP35914 325 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 FEN1P39748 380 aaKnown RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 MMP12P39900 470 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 CD79BP40259 229 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 EIF1P41567 113 aaKnown RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 SLC1A3P43003 542 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 TNFRSF4P43489 277 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 SLCO1A2P46721 670 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 LEPRP48357 1165 aaKnown RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 PITPNBP48739 271 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 CASP4P49662 377 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 MEOX2P50222 304 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 DNA2P51530 1060 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 NKX2-5P52952 324 aaPredicted RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 PRRX1P54821 245 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 C21orf59P57076 290 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 TAS2R60P59551 318 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 GABPAQ06546 454 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ELP6Q0PNE2 266 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 PPIL2Q13356 520 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 MED21Q13503 144 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ART3Q13508 389 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 DGCR6Q14129 220 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 SMCO1Q147U7 214 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 C16orf72Q14CZ0 275 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 EMC2Q15006 297 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 OXA1LQ15070 435 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 PON3Q15166 354 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ZNF74Q16587 644 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 TMEM44Q2T9K0 475 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 CT45A2Q5DJT8 189 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 DDI2Q5TDH0 399 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 NKAIN2Q5VXU1 208 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ZNF776Q68DI1 518 aaPredicted RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 SLC27A4Q6P1M0 643 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ZFP1Q6P2D0 407 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 TTC33Q6PID6 262 aaPredicted RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 SLC25A47Q6Q0C1 308 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 DHRS11Q6UWP2 260 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ZNF497Q6ZNH5 498 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 LRRC74BQ6ZQY2 392 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ZNF767PQ75MW2 155 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 DCXRQ7Z4W1 244 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 CYP4Z2PQ8N1L4 340 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 FAM89BQ8N5H3 189 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 TRAM1L1Q8N609 369 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ZNF781Q8N8C0 355 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 LRTM2Q8N967 370 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 SNX31Q8N9S9 440 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 SLC37A3Q8NCC5 494 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 OR7A2PQ8NGA2 310 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 OR1L3Q8NH93 324 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 MAPK15Q8TD08 544 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 UBTD2Q8WUN7 234 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 APOBEC4Q8WW27 367 aaKnown RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 UFD1Q92890 307 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 TCEAL3Q969E4 200 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 TAMM41Q96BW9 452 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 PLEKHA8Q96JA3 519 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ELMO2Q96JJ3 720 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 GPR137Q96N19 417 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 TAAR6Q96RI8 345 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 LPAR4Q99677 370 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ZNF251Q9BRH9 671 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 SEC22CQ9BRL7 303 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 TCEAL7Q9BRU2 100 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 FICDQ9BVA6 458 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 PAPOLGQ9BWT3 736 aaKnown RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 BCL2L14Q9BZR8 327 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ZYG11BQ9C0D3 744 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 DERL2Q9GZP9 239 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 SIRPDQ9H106 197 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 GOLPH3Q9H4A6 298 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 NARFLQ9H6Q4 476 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 COQ10BQ9H8M1 238 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 SIAEQ9HAT2 523 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 MYOZ1Q9NP98 299 aaPredicted RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 TREM1Q9NP99 234 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 IFT46Q9NQC8 304 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ZNF275Q9NSD4 429 aaPredicted RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 MAN2C1Q9NTJ4 1040 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 TBC1D13Q9NVG8 400 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 TMOD2Q9NZR1 351 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 COPS7AQ9UBW8 275 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 APOBEC3BQ9UH17 382 aaKnown RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 PSORS1C1Q9UIG5 152 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 FBXL4Q9UKA2 621 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 PILRBQ9UKJ0 227 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 ELF5Q9UKW6 265 aaPredicted RBP2.78□□□□□ -1.96
USP28-210ENST00000542033 PLLPQ9Y342 182 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 CPQQ9Y646 472 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 FKBP7Q9Y680 259 aa2.78□□□□□ -1.96
USP28-210ENST00000542033 RIMS1Q86UR5 1692 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms