RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 IGFBP2P18065 325 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 DRD5P21918 477 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 PRKACGP22612 351 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 CBLP22681 906 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 GGT2P36268 569 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 MAP3K8P41279 467 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 PPICP45877 212 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 CASP9P55211 416 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 ISL1P61371 349 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 PPP1CAP62136 330 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 RPP38P78345 283 aaKnown RBP7.67□□□□□ -1.18
CHD4-208ENST00000540960 CHRNEQ04844 493 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 MGAT2Q10469 447 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 LTB4RQ15722 352 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 DUSP5Q16690 384 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.67□□□□□ -1.18
CHD4-208ENST00000540960 DEFB110Q30KQ9 67 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 ZBED5Q49AG3 693 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 RPS26P11Q5JNZ5 115 aaPredicted RBP7.67□□□□□ -1.18
CHD4-208ENST00000540960 MEDAGQ5VYS4 303 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 HIST2H2BDQ6DRA6 164 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 TYW3Q6IPR3 259 aaKnown RBP7.67□□□□□ -1.18
CHD4-208ENST00000540960 RHBDD2Q6NTF9 364 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 PWWP2BQ6NUJ5 590 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 FAM180BQ6P0A1 224 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 MTFR2Q6P444 385 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 ZNF613Q6PF04 617 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 CASP12Q6UXS9 341 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 TTLL10Q6ZVT0 673 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 GALNT10Q86SR1 603 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 OR4N5Q8IXE1 308 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 SLC5A8Q8N695 610 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 AQP11Q8NBQ7 271 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 MORN4Q8NDC4 146 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 PLPP5Q8NEB5 264 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 C17orf47Q8NEP4 570 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 GPR32P1Q8NGA4 272 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 OR52R1Q8NGF1 315 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 OR5T3Q8NGG3 340 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 OR10Q1Q8NGQ4 319 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 ZNF420Q8TAQ5 688 aaPredicted RBP7.67□□□□□ -1.18
CHD4-208ENST00000540960 FAM110BQ8TC76 370 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 METTL21AQ8WXB1 218 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 ACOT11Q8WXI4 607 aaPredicted RBP7.67□□□□□ -1.18
CHD4-208ENST00000540960 OSTF1Q92882 214 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 CDS1Q92903 461 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 MPP4Q96JB8 637 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 PTCHD1Q96NR3 888 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 MYCBPQ99417 103 aaPredicted RBP7.67□□□□□ -1.18
CHD4-208ENST00000540960 WDR77Q9BQA1 342 aaPredicted RBP7.67□□□□□ -1.18
CHD4-208ENST00000540960 YIPF4Q9BSR8 244 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 SPRTNQ9H040 489 aaPredicted RBP7.67□□□□□ -1.18
CHD4-208ENST00000540960 RACGAP1Q9H0H5 632 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 SERHL2Q9H4I8 314 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 CLN6Q9NWW5 311 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 MRPS2Q9Y399 296 aaKnown RBP7.67□□□□□ -1.18
CHD4-208ENST00000540960 COMMD3-BMI1R4GMX3 469 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 SPTBP11277 2137 aa7.67□□□□□ -1.18
CHD4-208ENST00000540960 EFCAB10A6NFE3 127 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 FAM227AF5H4B4 570 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 DIRAS1O95057 198 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 HMGN1P05114 100 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 GNAO1P09471 354 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 ACP2P11117 423 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 ATP6V1B1P15313 513 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 RPS4Y1P22090 263 aaKnown RBP7.66□□□□□ -1.18
CHD4-208ENST00000540960 CRHBPP24387 322 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 HOXC12P31275 282 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 RBM34P42696 430 aaKnown RBP7.66□□□□□ -1.18
CHD4-208ENST00000540960 ALDH3B2P48448 385 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 CLK3P49761 638 aaKnown RBP7.66□□□□□ -1.18
CHD4-208ENST00000540960 SMSP52788 366 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 CRISP1P54107 249 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 ATP12AP54707 1039 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 COPZ1P61923 177 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 DCDP81605 110 aaKnown RBP7.66□□□□□ -1.18
CHD4-208ENST00000540960 CDK5R2Q13319 367 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 ZNF267Q14586 743 aaPredicted RBP7.66□□□□□ -1.18
CHD4-208ENST00000540960 MAPK11Q15759 364 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 ZNF141Q15928 474 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 C3AR1Q16581 482 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 ZNF750Q32MQ0 723 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 FLYWCH1Q4VC44 716 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 TRMT12Q53H54 448 aaKnown RBP7.66□□□□□ -1.18
CHD4-208ENST00000540960 FAM111BQ6SJ93 734 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 FAM180AQ6UWF9 173 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 ZNF730Q6ZMV8 503 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 FRRS1Q6ZNA5 592 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 PLEKHM3Q6ZWE6 761 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 SLC29A4Q7RTT9 530 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 GALNT5Q7Z7M9 940 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 TMEM179BQ7Z7N9 219 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 TMEM151BQ8IW70 566 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 GALNT16Q8N428 558 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 CLDN22Q8N7P3 220 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 VANGL1Q8TAA9 524 aaPredicted RBP7.66□□□□□ -1.18
CHD4-208ENST00000540960 DNAJA4Q8WW22 397 aaPredicted RBP7.66□□□□□ -1.18
CHD4-208ENST00000540960 TMEM158Q8WZ71 300 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 UCN3Q969E3 161 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 ZNF501Q96CX3 271 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms