RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 PKDREJQ9NTG1 2253 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 INTS1Q8N201 2190 aaKnown RBP15.14■□□□□ 0.01
CD9-209ENST00000540891 FBP2O00757 339 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 ARAFP10398 606 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 RYKP34925 604 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 KIR2DL2P43627 348 aaPredicted RBP15.14■□□□□ 0.01
CD9-209ENST00000540891 EEF1A1P68104 462 aaKnown RBP15.14■□□□□ 0.01
CD9-209ENST00000540891 SNTB1Q13884 538 aaKnown RBP15.14■□□□□ 0.01
CD9-209ENST00000540891 TMEM176BQ3YBM2 270 aaPredicted RBP15.14■□□□□ 0.01
CD9-209ENST00000540891 RUNDC3AQ59EK9 446 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 HBMQ6B0K9 141 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 OR2A2Q6IF42 318 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 VWA1Q6PCB0 445 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 PLEKHM3Q6ZWE6 761 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 DHDDSQ86SQ9 333 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 PEX5LQ8IYB4 626 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 ATP6V1C2Q8NEY4 427 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 C10orf82Q8WW14 230 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 OSTF1Q92882 214 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 RNASE6Q93091 150 aaKnown RBP15.14■□□□□ 0.01
CD9-209ENST00000540891 CCDC106Q9BWC9 280 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 RSPO3Q9BXY4 272 aaPredicted RBP15.14■□□□□ 0.01
CD9-209ENST00000540891 SRXN1Q9BYN0 137 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 BCL2L10Q9HD36 194 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 SAR1AQ9NR31 198 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 PAQR5Q9NXK6 330 aaPredicted RBP15.14■□□□□ 0.01
CD9-209ENST00000540891 KLHL14Q9P2G3 628 aa15.14■□□□□ 0.01
CD9-209ENST00000540891 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.14■□□□□ 0.01
CD9-209ENST00000540891 A0A0G2JPF8 293 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 CDHR4A6H8M9 788 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 HNRNPCL2B2RXH8 293 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 HNRNPCL3B7ZW38 293 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 EEF1E1-BLOC1S5C9J1V9 151 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 ANGPT2O15123 496 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 EEF1E1O43324 174 aaKnown RBP15.13■□□□□ 0.01
CD9-209ENST00000540891 HNRNPCL1O60812 293 aaKnown RBP15.13■□□□□ 0.01
CD9-209ENST00000540891 CRHP06850 196 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 HNRNPCL4P0DMR1 293 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 PPIBP23284 216 aaKnown RBP15.13■□□□□ 0.01
CD9-209ENST00000540891 FBN2P35556 2912 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 CACNA1DQ01668 2161 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 SELPLGQ14242 412 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 LIN52Q52LA3 116 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 GCNT6Q5T4J0 391 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 PRAMEF8Q5VWM4 474 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 PRAMEF7Q5VXH5 474 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 CLIP4Q8N3C7 705 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 TMEM234Q8WY98 164 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 STARD4Q96DR4 205 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 ANKRD27Q96NW4 1050 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 CGREF1Q99674 301 aa15.13■□□□□ 0.01
CD9-209ENST00000540891 ZNF443Q9Y2A4 671 aaPredicted RBP15.13■□□□□ 0.01
CD9-209ENST00000540891 A0A1W2PNR3 127 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 GJE1A6NN92 205 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 PGM3O95394 542 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 THBS1P07996 1170 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 FCGR2AP12318 317 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 UQCRC1P31930 480 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 IDH2P48735 452 aaKnown RBP15.12■□□□□ 0.01
CD9-209ENST00000540891 CARD18P57730 90 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 MERTKQ12866 999 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 EPS8Q12929 822 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 KLF10Q13118 480 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 GNA13Q14344 377 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 ADRM1Q16186 407 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 ZNF239Q16600 458 aaKnown RBP15.12■□□□□ 0.01
CD9-209ENST00000540891 RNF220Q5VTB9 566 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 EEF1A1P5Q5VTE0 462 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 C3orf33Q6P1S2 294 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 GRINAQ7Z429 371 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 GDF7Q7Z4P5 450 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 BTLAQ7Z6A9 289 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 LUZP2Q86TE4 346 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 NFKBIDQ8NI38 313 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 ZNF563Q8TA94 476 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 BBS10Q8TAM1 723 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 PIGMQ9H3S5 423 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 CTPS2Q9NRF8 586 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 PACSIN3Q9UKS6 424 aa15.12■□□□□ 0.01
CD9-209ENST00000540891 MCTS1Q9ULC4 181 aaKnown RBP15.12■□□□□ 0.01
CD9-209ENST00000540891 TMEM247A6NEH6 219 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 CFAP73A6NFT4 308 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 A8MXE2 369 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 FAAHO00519 579 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 CGAP01215 116 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 PABPC4LP0CB38 370 aaKnown RBP15.11■□□□□ 0.01
CD9-209ENST00000540891 ACAA2P42765 397 aaKnown RBP15.11■□□□□ 0.01
CD9-209ENST00000540891 MTPNP58546 118 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 SIRPAP78324 504 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 CDK6Q00534 326 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 NFYCQ13952 458 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 PDSS1Q5T2R2 415 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 PPP4R4Q6NUP7 873 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 ADGRG3Q86Y34 549 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 PTOV1Q86YD1 416 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 CNEP1R1Q8N9A8 125 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 ROBO4Q8WZ75 1007 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 C14orf79Q96F83 325 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 SPATA9Q9BWV2 254 aa15.11■□□□□ 0.01
CD9-209ENST00000540891 TMEM38AQ9H6F2 299 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms