RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 CCL21O00585 134 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 LRRTM2O43300 516 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 FRS3O43559 492 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 WDR1O75083 606 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 NTN1O95631 604 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 PRG2P13727 222 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 HSD17B1P14061 328 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 ZNF708P17019 499 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 TCN1P20061 433 aaPredicted RBP13.99□□□□□ -0.17
DDB1-218ENST00000540784 ME2P23368 584 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 ACVR2AP27037 513 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 APOBEC1P41238 236 aaKnown RBP13.99□□□□□ -0.17
DDB1-218ENST00000540784 SLC1A3P43003 542 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 HTR3AP46098 478 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 LRRC23Q53EV4 343 aaPredicted RBP13.99□□□□□ -0.17
DDB1-218ENST00000540784 CYBRD1Q53TN4 286 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 GLYATQ6IB77 296 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 WBP2NLQ6ICG8 309 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 C3P1Q6ZMU1 363 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 PLEKHM3Q6ZWE6 761 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 CHMP1BQ7LBR1 199 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 GRINAQ7Z429 371 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 UBQLNLQ8IYU4 475 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 EID3Q8N140 333 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 ARHGAP24Q8N264 748 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 CADM2Q8N3J6 435 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 MEIOBQ8N635 442 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 ATP6V1C2Q8NEY4 427 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 GPR32P1Q8NGA4 272 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 SMPDL3BQ92485 455 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 EGFL7Q9UHF1 273 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 BAG5Q9UL15 447 aa13.99□□□□□ -0.17
DDB1-218ENST00000540784 H0Y3Z8 333 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 SYT5O00445 386 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 GYG2O15488 501 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 EFNA2O43921 213 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 ATP5HO75947 161 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 EPPINO95925 133 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 OPN1LWP04000 364 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 FESP07332 822 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 NCK1P16333 377 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 GGT1P19440 569 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 IL11P20809 199 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 CD247P20963 164 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 ELK4P28324 431 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 PTGER4P35408 488 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 MSX2P35548 267 aaPredicted RBP13.98□□□□□ -0.17
DDB1-218ENST00000540784 CRYBA2P53672 197 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 DLX5P56178 289 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 CLDN18P56856 261 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 RGS8P57771 180 aaPredicted RBP13.98□□□□□ -0.17
DDB1-218ENST00000540784 SELENOWP63302 87 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 HOXC5Q00444 222 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 BNIP1Q12981 228 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 C4orf17Q53FE4 359 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 POMZP3Q6PJE2 187 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 C6orf89Q6UWU4 347 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 COMTD1Q86VU5 262 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 ULK2Q8IYT8 1036 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 FAM156AQ8NDB6 213 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 OR52E4Q8NGH9 312 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 ZPLD1Q8TCW7 415 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 LZICQ8WZA0 190 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 PROX1Q92786 737 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 FAM162AQ96A26 154 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 TPD52L3Q96J77 140 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 ARHGDIGQ99819 225 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 ZNF559Q9BR84 538 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 ADAM19Q9H013 955 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 ADPRHL2Q9NX46 363 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 RPS6KB2Q9UBS0 482 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 SLC5A6Q9Y289 635 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 PCNX3Q9H6A9 2034 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 SVILO95425 2214 aa13.98□□□□□ -0.17
DDB1-218ENST00000540784 GJE1A6NN92 205 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 E9PLN8 166 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 SEC14L5O43304 696 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 FKBP2P26885 142 aaKnown RBP13.97□□□□□ -0.17
DDB1-218ENST00000540784 TACR3P29371 465 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 RASSF2P50749 326 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 POLR2HP52434 150 aaKnown RBP13.97□□□□□ -0.17
DDB1-218ENST00000540784 SUCLG1P53597 346 aaKnown RBP13.97□□□□□ -0.17
DDB1-218ENST00000540784 CLDN20P56880 219 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 RPS3AP61247 264 aaKnown RBP13.97□□□□□ -0.17
DDB1-218ENST00000540784 CEACAM7Q14002 265 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 TMEM176BQ3YBM2 270 aaPredicted RBP13.97□□□□□ -0.17
DDB1-218ENST00000540784 C1orf185Q5T7R7 199 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 TMEM211Q6ICI0 200 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 FJX1Q86VR8 437 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 RANBP3LQ86VV4 465 aaPredicted RBP13.97□□□□□ -0.17
DDB1-218ENST00000540784 ADGRG3Q86Y34 549 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 VKORC1Q9BQB6 163 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 BTBD10Q9BSF8 475 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 PRR14Q9BWN1 585 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 TRIM2Q9C040 744 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 TMEM185BQ9H7F4 350 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 TMEM27Q9HBJ8 222 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 CTPS2Q9NRF8 586 aa13.97□□□□□ -0.17
DDB1-218ENST00000540784 PRPF19Q9UMS4 504 aaKnown RBP13.97□□□□□ -0.17
DDB1-218ENST00000540784 SLC9A8Q9Y2E8 581 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms