RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 HNRNPCL2B2RXH8 293 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 HNRNPCL3B7ZW38 293 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 ANGPT2O15123 496 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 HNRNPCL1O60812 293 aaKnown RBP16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 HNRNPCL4P0DMR1 293 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 ARAFP10398 606 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 GPX2P18283 190 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 OPRM1P35372 400 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 KLF10Q13118 480 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 SNTB1Q13884 538 aaKnown RBP16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 SELPLGQ14242 412 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 TMEM176BQ3YBM2 270 aaPredicted RBP16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 HBMQ6B0K9 141 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 ZNF836Q6ZNA1 936 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 DHDDSQ86SQ9 333 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 MCEMP1Q8IX19 187 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 CMIPQ8IY22 773 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 PEX5LQ8IYB4 626 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 OSTF1Q92882 214 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 SFXN3Q9BWM7 321 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 RNF122Q9H9V4 155 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 ACER3Q9NUN7 267 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 ZNF443Q9Y2A4 671 aaPredicted RBP16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 CACNA1DQ01668 2161 aa16.41■□□□□ 0.22
SNRPA1-203ENST00000540017 SYT5O00445 386 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 PPIBP23284 216 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 KIR2DL2P43627 348 aaPredicted RBP16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 ASCL1P50553 236 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 EEF1A1P68104 462 aaKnown RBP16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 MERTKQ12866 999 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 GUSBP1Q15486 140 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 ADRM1Q16186 407 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 FBXL19-AS1Q494R0 122 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 GCNT6Q5T4J0 391 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 VWA1Q6PCB0 445 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 PLEKHM3Q6ZWE6 761 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 DMRTC2Q8IXT2 367 aaPredicted RBP16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 CLIP4Q8N3C7 705 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 NFKBIDQ8NI38 313 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 ANKRD27Q96NW4 1050 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 CGREF1Q99674 301 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 CCDC106Q9BWC9 280 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 SRXN1Q9BYN0 137 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 COQ10BQ9H8M1 238 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 BCL2L10Q9HD36 194 aa16.4■□□□□ 0.22
SNRPA1-203ENST00000540017 ITPR2Q14571 2701 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 A0A1W2PNR3 127 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 CDHR4A6H8M9 788 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 TMEM247A6NEH6 219 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 EEF1E1-BLOC1S5C9J1V9 151 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 EEF1E1O43324 174 aaKnown RBP16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 PGM3O95394 542 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 GKN3PP0CG01 181 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 IDH2P48735 452 aaKnown RBP16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 SEC24CP53992 1094 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 GYS2P54840 703 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 CARD18P57730 90 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 MTPNP58546 118 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 SELENBP1Q13228 472 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 NFYCQ13952 458 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 GNA13Q14344 377 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 CAPRIN1Q14444 709 aaKnown RBP16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 LIN52Q52LA3 116 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 PRAMEF8Q5VWM4 474 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 PRAMEF7Q5VXH5 474 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 PPP4R4Q6NUP7 873 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 ZNF563Q8TA94 476 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 TMEM234Q8WY98 164 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 STARD4Q96DR4 205 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 CTPS2Q9NRF8 586 aa16.39■□□□□ 0.21
SNRPA1-203ENST00000540017 EVPLLA8MZ36 301 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 THBS1P07996 1170 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 PRG2P13727 222 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 UQCRC1P31930 480 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 ACAA2P42765 397 aaKnown RBP16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 SIRPAP78324 504 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 CDK6Q00534 326 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 EPS8Q12929 822 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 OR2A2Q6IF42 318 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 BTLAQ7Z6A9 289 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 LUZP2Q86TE4 346 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 ADGRG3Q86Y34 549 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 CNEP1R1Q8N9A8 125 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 BBS10Q8TAM1 723 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 ROBO4Q8WZ75 1007 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 RNASE6Q93091 150 aaKnown RBP16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 SLC39A3Q9BRY0 314 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 TMEM38AQ9H6F2 299 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 PAQR5Q9NXK6 330 aaPredicted RBP16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 ARMCX1Q9P291 453 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 CLEC4AQ9UMR7 237 aa16.38■□□□□ 0.21
SNRPA1-203ENST00000540017 CFAP73A6NFT4 308 aa16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 C5orf58C9J3I9 102 aa16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 SYNGR4O95473 234 aa16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 CRHP06850 196 aa16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 PABPC4LP0CB38 370 aaKnown RBP16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 KLK2P20151 261 aa16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 LARS2Q15031 903 aaKnown RBP16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 ZNF239Q16600 458 aaKnown RBP16.37■□□□□ 0.21
SNRPA1-203ENST00000540017 PDSS1Q5T2R2 415 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms