RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 SLC43A2Q8N370 569 aa19.78■□□□□ 0.76
SCARB1-206ENST00000539320 XAGE5Q8WWM1 108 aa19.78■□□□□ 0.76
SCARB1-206ENST00000539320 CCDC115Q96NT0 180 aa19.78■□□□□ 0.76
SCARB1-206ENST00000539320 CCL19Q99731 98 aa19.78■□□□□ 0.76
SCARB1-206ENST00000539320 SLC35A5Q9BS91 424 aa19.78■□□□□ 0.76
SCARB1-206ENST00000539320 TACO1Q9BSH4 297 aaKnown RBP19.78■□□□□ 0.76
SCARB1-206ENST00000539320 THUMPD3Q9BV44 507 aaKnown RBP19.78■□□□□ 0.76
SCARB1-206ENST00000539320 MARCOQ9UEW3 520 aaPredicted RBP19.78■□□□□ 0.76
SCARB1-206ENST00000539320 DSCAMO60469 2012 aa19.78■□□□□ 0.76
SCARB1-206ENST00000539320 RAI1Q7Z5J4 1906 aaPredicted RBP19.77■□□□□ 0.76
SCARB1-206ENST00000539320 TMEM120BA0PK00 339 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 SMPD2O60906 423 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 PRKD3O94806 890 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 H6PDO95479 791 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 PGCP20142 388 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 NME5P56597 212 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 RAC3P60763 192 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 NKX6-1P78426 367 aaPredicted RBP19.77■□□□□ 0.76
SCARB1-206ENST00000539320 HPCAP84074 193 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 FRRS1Q6ZNA5 592 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 NUFIP2Q7Z417 695 aaKnown RBP19.77■□□□□ 0.76
SCARB1-206ENST00000539320 WFDC8Q8IUA0 241 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 TUSC5Q8IXB3 177 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 LRRC75A-AS1Q8N1F1 130 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 ZNF619Q8N2I2 560 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 FAM71CQ8NEG0 241 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 TMEM234Q8WY98 164 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 ROPN1LQ96C74 230 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 QRSL1Q9H0R6 528 aaKnown RBP19.77■□□□□ 0.76
SCARB1-206ENST00000539320 KLHL9Q9P2J3 617 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 BTNL2Q9UIR0 455 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 SLC35A3Q9Y2D2 325 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 NF1P21359 2839 aa19.77■□□□□ 0.76
SCARB1-206ENST00000539320 VPS13CQ709C8 3753 aa19.77■□□□□ 0.75
SCARB1-206ENST00000539320 IGHV3-15A0A0B4J1V0 119 aa19.76■□□□□ 0.75
SCARB1-206ENST00000539320 KLF4O43474 513 aa19.76■□□□□ 0.75
SCARB1-206ENST00000539320 ENPP1P22413 925 aa19.76■□□□□ 0.75
SCARB1-206ENST00000539320 NR1H2P55055 460 aa19.76■□□□□ 0.75
SCARB1-206ENST00000539320 WDR4P57081 412 aaKnown RBP19.76■□□□□ 0.75
SCARB1-206ENST00000539320 SESN3P58005 492 aa19.76■□□□□ 0.75
SCARB1-206ENST00000539320 UFM1P61960 85 aa19.76■□□□□ 0.75
SCARB1-206ENST00000539320 MAPK14Q16539 360 aa19.76■□□□□ 0.75
SCARB1-206ENST00000539320 Q5PR19 223 aa19.76■□□□□ 0.75
SCARB1-206ENST00000539320 SPATA19Q7Z5L4 167 aa19.76■□□□□ 0.75
SCARB1-206ENST00000539320 P3H2Q8IVL5 708 aa19.76■□□□□ 0.75
SCARB1-206ENST00000539320 GABRG1Q8N1C3 465 aa19.76■□□□□ 0.75
SCARB1-206ENST00000539320 STEAP2Q8NFT2 490 aa19.76■□□□□ 0.75
SCARB1-206ENST00000539320 MGARPQ8TDB4 240 aa19.76■□□□□ 0.75
SCARB1-206ENST00000539320 TEX37Q96LM6 180 aa19.76■□□□□ 0.75
SCARB1-206ENST00000539320 OR5B2Q96R09 309 aa19.76■□□□□ 0.75
SCARB1-206ENST00000539320 ACER3Q9NUN7 267 aa19.76■□□□□ 0.75
SCARB1-206ENST00000539320 C9JVG2 144 aa19.75■□□□□ 0.75
SCARB1-206ENST00000539320 ARHGEF9O43307 516 aa19.75■□□□□ 0.75
SCARB1-206ENST00000539320 GCM2O75603 506 aaPredicted RBP19.75■□□□□ 0.75
SCARB1-206ENST00000539320 PGM1P36871 562 aa19.75■□□□□ 0.75
SCARB1-206ENST00000539320 MERTKQ12866 999 aa19.75■□□□□ 0.75
SCARB1-206ENST00000539320 ZNF704Q6ZNC4 412 aaPredicted RBP19.75■□□□□ 0.75
SCARB1-206ENST00000539320 PLEKHM3Q6ZWE6 761 aa19.75■□□□□ 0.75
SCARB1-206ENST00000539320 SLC25A43Q8WUT9 341 aaPredicted RBP19.75■□□□□ 0.75
SCARB1-206ENST00000539320 SAP130Q9H0E3 1048 aa19.75■□□□□ 0.75
SCARB1-206ENST00000539320 BCO1Q9HAY6 547 aa19.75■□□□□ 0.75
SCARB1-206ENST00000539320 SERINC1Q9NRX5 453 aa19.75■□□□□ 0.75
SCARB1-206ENST00000539320 THAP1Q9NVV9 213 aa19.75■□□□□ 0.75
SCARB1-206ENST00000539320 TRPC5OSA6NMA1 111 aa19.74■□□□□ 0.75
SCARB1-206ENST00000539320 SMAD9O15198 467 aaKnown RBP19.74■□□□□ 0.75
SCARB1-206ENST00000539320 HDAC3O15379 428 aa19.74■□□□□ 0.75
SCARB1-206ENST00000539320 SNNO75324 88 aaPredicted RBP19.74■□□□□ 0.75
SCARB1-206ENST00000539320 BCAS1O75363 584 aaPredicted RBP19.74■□□□□ 0.75
SCARB1-206ENST00000539320 YES1P07947 543 aa19.74■□□□□ 0.75
SCARB1-206ENST00000539320 IL32P24001 234 aa19.74■□□□□ 0.75
SCARB1-206ENST00000539320 EPHA3P29320 983 aa19.74■□□□□ 0.75
SCARB1-206ENST00000539320 GPAT3Q53EU6 434 aa19.74■□□□□ 0.75
SCARB1-206ENST00000539320 SYT14P1Q58G82 188 aa19.74■□□□□ 0.75
SCARB1-206ENST00000539320 RNF130Q86XS8 419 aa19.74■□□□□ 0.75
SCARB1-206ENST00000539320 TRIML2Q8N7C3 387 aa19.74■□□□□ 0.75
SCARB1-206ENST00000539320 S100PBPQ96BU1 408 aa19.74■□□□□ 0.75
SCARB1-206ENST00000539320 PLPPR2Q96GM1 343 aa19.74■□□□□ 0.75
SCARB1-206ENST00000539320 ZBTB18Q99592 522 aa19.74■□□□□ 0.75
SCARB1-206ENST00000539320 PSD2Q9BQI7 771 aa19.74■□□□□ 0.75
SCARB1-206ENST00000539320 GSX1Q9H4S2 264 aaPredicted RBP19.74■□□□□ 0.75
SCARB1-206ENST00000539320 WDR55Q9H6Y2 383 aaPredicted RBP19.74■□□□□ 0.75
SCARB1-206ENST00000539320 SPIN1Q9Y657 262 aaPredicted RBP19.74■□□□□ 0.75
SCARB1-206ENST00000539320 USF3Q68DE3 2245 aa19.74■□□□□ 0.75
SCARB1-206ENST00000539320 GOLGA8QA0A0J9YX86 632 aa19.73■□□□□ 0.75
SCARB1-206ENST00000539320 PRAMEF27A3QJZ7 478 aa19.73■□□□□ 0.75
SCARB1-206ENST00000539320 GOLGA8OA6NCC3 632 aa19.73■□□□□ 0.75
SCARB1-206ENST00000539320 CCDC154A6NI56 674 aa19.73■□□□□ 0.75
SCARB1-206ENST00000539320 GOLGA8NF8WBI6 632 aa19.73■□□□□ 0.75
SCARB1-206ENST00000539320 HMGN4O00479 90 aa19.73■□□□□ 0.75
SCARB1-206ENST00000539320 PGRP06401 933 aa19.73■□□□□ 0.75
SCARB1-206ENST00000539320 IL12AP29459 219 aa19.73■□□□□ 0.75
SCARB1-206ENST00000539320 ANXA11P50995 505 aaKnown RBP19.73■□□□□ 0.75
SCARB1-206ENST00000539320 TXNL4AP83876 142 aaKnown RBP19.73■□□□□ 0.75
SCARB1-206ENST00000539320 CHRNEQ04844 493 aa19.73■□□□□ 0.75
SCARB1-206ENST00000539320 HMGN2P46Q86SG4 172 aa19.73■□□□□ 0.75
SCARB1-206ENST00000539320 ZNF563Q8TA94 476 aa19.73■□□□□ 0.75
SCARB1-206ENST00000539320 PANX1Q96RD7 426 aa19.73■□□□□ 0.75
SCARB1-206ENST00000539320 HDHD5Q9BXW7 423 aa19.73■□□□□ 0.75
SCARB1-206ENST00000539320 EXOSC3Q9NQT5 275 aaKnown RBP19.73■□□□□ 0.75
SCARB1-206ENST00000539320 ST6GALNAC1Q9NSC7 600 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms