RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 MECP2P51608 486 aaKnown RBP17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 OLFML2AQ68BL7 652 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 LHX8Q68G74 356 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 NHLRC1Q6VVB1 395 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 C17orf64Q86WR6 236 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 CDH26Q8IXH8 852 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 OR52L1Q8NGH7 329 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 OR2A12Q8NGT7 310 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 SP7Q8TDD2 431 aaPredicted RBP17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 WDR89Q96FK6 387 aaPredicted RBP17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 ADAM29Q9UKF5 820 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 A0A1W2PPK0 400 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 ANKRD61A6NGH8 418 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 WASH3PC4AMC7 463 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 AQP8O94778 261 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 ABLIM3O94929 683 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 HPP00738 406 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 ANXA7P20073 488 aaKnown RBP17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 NT5EP21589 574 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 MAOBP27338 520 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 ARFIP1P53367 373 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 ZNF85Q03923 595 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 TGM3Q08188 693 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 GPNMBQ14956 572 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 PABPC1L2AQ5JQF8 200 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 HTR3DQ70Z44 454 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 CMTM8Q8IZV2 173 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 OR5J2Q8NH18 312 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 GANCQ8TET4 914 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 ZDHHC1Q8WTX9 485 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 BBS4Q96RK4 519 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 TEAD3Q99594 435 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 MCHR1Q99705 422 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 OPN4Q9UHM6 478 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 MYO10Q9HD67 2058 aa17.24■□□□□ 0.35
SFSWAP-207ENST00000538548 A0A1W2PQ45 241 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 A0A1W2PQY0 241 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 BHLHE40O14503 412 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 GRM6O15303 877 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 NDUFS4O43181 175 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 KDM4BO94953 1096 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 CBX7O95931 251 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 MRPL3P09001 348 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 SBK2P0C263 348 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 PRKAR1BP31321 381 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 LINC00303Q3SY05 128 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 OVCH1Q7RTY7 1134 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 UBE2Q1Q7Z7E8 422 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 TRAPPC5Q8IUR0 188 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 PCSK9Q8NBP7 692 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 FANK1Q8TC84 345 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 GCDHQ92947 438 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 C16orf58Q96GQ5 468 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 SMAD5Q99717 465 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 PELI2Q9HAT8 420 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 POLMQ9NP87 494 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 SLC6A20Q9NP91 592 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 EXOSC3Q9NQT5 275 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 STARD7Q9NQZ5 370 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 ST6GALNAC2Q9UJ37 374 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 ANTXRLA6NF34 631 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 CHURC1-FNTBB4DL54 471 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 KHDRBS3O75525 346 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 PRG2P13727 222 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 HOXA1P49639 335 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 SLC16A1P53985 500 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 DLX5P56178 289 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 TRA2BP62995 288 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 PDSS1Q5T2R2 415 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 ZNF660Q6AZW8 331 aaPredicted RBP17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 LRRC46Q96FV0 321 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 PAWRQ96IZ0 340 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 UQCC2Q9BRT2 126 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 AK6Q9Y3D8 172 aaKnown RBP17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 PRKAB1Q9Y478 270 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 PCDHGA5Q9Y5G8 931 aa17.23■□□□□ 0.35
SFSWAP-207ENST00000538548 A0A1B0GW55 424 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 UNC119BA6NIH7 251 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 SIGLEC6O43699 453 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 LILRB5O75023 590 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 UCHL1P09936 223 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 DUX4L2P0CJ85 424 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 DUX4L3P0CJ86 424 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 DUX4L4P0CJ87 422 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 DUX4L5P0CJ88 424 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 DUX4L6P0CJ89 424 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 DUX4L7P0CJ90 424 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 TIMP2P16035 220 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 PTGER1P34995 402 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 RECQLP46063 649 aaPredicted RBP17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 KRT33BQ14525 404 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 LNX2Q8N448 690 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 OR56A1Q8NGH5 318 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 FCAMRQ8WWV6 532 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 ADGRL4Q9HBW9 690 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 CALML5Q9NZT1 146 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 DUX4Q9UBX2 424 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 COL4A3Q01955 1670 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 ANKRD20A5PA0PJZ0 165 aa17.22■□□□□ 0.35
SFSWAP-207ENST00000538548 FAM86C2PA6NEL3 165 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms