RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 RPS6KB2Q9UBS0 482 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 ADAM18Q9Y3Q7 739 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 RPL36Q9Y3U8 105 aaKnown RBP12.94□□□□□ -0.34
ACTN1-205ENST00000538545 GTPBP1O00178 669 aaKnown RBP12.94□□□□□ -0.34
ACTN1-205ENST00000538545 ABCD3P28288 659 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 RGS6P49758 472 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 CDH11P55287 796 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 ACY1Q03154 408 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 PRKCDQ05655 676 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 FHL1Q13642 323 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 OCLNQ16625 522 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 KLHL12Q53G59 568 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 HLA-DQA1Q5Y7H0 255 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 BICRALQ6AI39 1079 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 ZNF613Q6PF04 617 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 SLCO6A1Q86UG4 719 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 PPP1R3BQ86XI6 285 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 FAM181AQ8N9Y4 354 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 OR1N1Q8NGS0 311 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 OSTF1Q92882 214 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 C3orf49Q96BT1 292 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 TRMT61AQ96FX7 289 aaKnown RBP12.94□□□□□ -0.34
ACTN1-205ENST00000538545 ZC3H10Q96K80 434 aaKnown RBP12.94□□□□□ -0.34
ACTN1-205ENST00000538545 OPALINQ96PE5 141 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 CORINQ9Y5Q5 1042 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 CNOT1A5YKK6 2376 aaKnown RBP12.94□□□□□ -0.34
ACTN1-205ENST00000538545 SCDO00767 359 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 DYRK3O43781 588 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 HEXBP07686 556 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 MRPL3P09001 348 aaKnown RBP12.94□□□□□ -0.34
ACTN1-205ENST00000538545 CLK1P49759 484 aaKnown RBP12.94□□□□□ -0.34
ACTN1-205ENST00000538545 PLCXD2Q0VAA5 305 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.94□□□□□ -0.34
ACTN1-205ENST00000538545 SLC46A3Q7Z3Q1 461 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 GRAMD2AQ8IUY3 354 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 SLITRK4Q8IW52 837 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 CARFQ8N187 725 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 OR7G1Q8NGA0 311 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 GATAD2BQ8WXI9 593 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 DAZLQ92904 295 aaKnown RBP12.94□□□□□ -0.34
ACTN1-205ENST00000538545 OMA1Q96E52 524 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 Q96MT0 163 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 SLC38A2Q96QD8 506 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 NPAS1Q99742 590 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 CDCA4Q9BXL8 241 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 OR51V1Q9H2C8 321 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 FN3KQ9H479 309 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 UBQLN4Q9NRR5 601 aa12.94□□□□□ -0.34
ACTN1-205ENST00000538545 CNOT2Q9NZN8 540 aaKnown RBP12.94□□□□□ -0.34
ACTN1-205ENST00000538545 URB1O60287 2271 aaKnown RBP12.93□□□□□ -0.34
ACTN1-205ENST00000538545 M0R3G1 203 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 BHLHE40O14503 412 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 HCRTR2O43614 444 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 ALOX12BO75342 701 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 IL33O95760 270 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 NUDT14O95848 222 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 PNLIPP16233 465 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 BMP7P18075 431 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 TCEA1P23193 301 aaKnown RBP12.93□□□□□ -0.34
ACTN1-205ENST00000538545 ITPKBP27987 946 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 IL12BP29460 328 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 LIPKQ5VXJ0 399 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 APCDD1LQ8NCL9 501 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 NR4A3Q92570 626 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 ART5Q96L15 291 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 ZNF578Q96N58 590 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-205ENST00000538545 COPS7AQ9UBW8 275 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 SMIM30A4D0T7 59 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 D6RAR5 112 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 CELA2AP08217 269 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 IFI6P09912 130 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 SP9P0CG40 484 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 UBL4AP11441 157 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 MPLP40238 635 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 MTNR1AP48039 350 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 GPR143P51810 404 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 ZNF117Q03924 483 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 FNDC7Q5VTL7 733 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 C1QL3Q5VWW1 255 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 ANKRD37Q7Z713 158 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 SIRT6Q8N6T7 355 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 OR51G2Q8NGK0 314 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 OR9Q1Q8NGQ5 310 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 TM9SF4Q92544 642 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 PELOQ9BRX2 385 aaKnown RBP12.93□□□□□ -0.34
ACTN1-205ENST00000538545 TRIM2Q9C040 744 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 POLR2J2Q9GZM3 115 aaKnown RBP12.93□□□□□ -0.34
ACTN1-205ENST00000538545 MCCC2Q9HCC0 563 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 ERGIC3Q9Y282 383 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 LSM2Q9Y333 95 aaKnown RBP12.93□□□□□ -0.34
ACTN1-205ENST00000538545 LAMA5O15230 3695 aa12.93□□□□□ -0.34
ACTN1-205ENST00000538545 ZFHX4Q86UP3 3567 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 FRG2CA6NGY1 282 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 B4DXG7 233 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 PRODHO43272 600 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 FMO6PO60774 539 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 SOX30O94993 753 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 NADKO95544 446 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-205ENST00000538545 LALBAP00709 142 aa12.92□□□□□ -0.34
ACTN1-205ENST00000538545 MSL3P1P0C860 447 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms