RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 AGR2O95994 175 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 MRPS21P82921 87 aaKnown RBP8.05□□□□□ -1.12
UBE3B-208ENST00000538070 HYAL4Q2M3T9 481 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 PRICKLE4Q2TBC4 344 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 TMEM201Q5SNT2 666 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 OR5M10Q6IEU7 315 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 PAMR1Q6UXH9 720 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 IZUMO1Q8IYV9 350 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 RFLNBQ8N5W9 214 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 SAMD12Q8N8I0 201 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 ZNF563Q8TA94 476 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 FLVCR1-AS1Q8TAF5 88 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 SNX33Q8WV41 574 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 SLC25A46Q96AG3 418 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 PPP1R14BQ96C90 147 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 FOLH1BQ9HBA9 442 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 SRA1Q9HD15 236 aaKnown RBP8.05□□□□□ -1.12
UBE3B-208ENST00000538070 MEPEQ9NQ76 525 aaPredicted RBP8.05□□□□□ -1.12
UBE3B-208ENST00000538070 NLKQ9UBE8 527 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 NUFIP1Q9UHK0 495 aaKnown RBP8.05□□□□□ -1.12
UBE3B-208ENST00000538070 GNG8Q9UK08 70 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 SCML1Q9UN30 329 aa8.05□□□□□ -1.12
UBE3B-208ENST00000538070 COL6A3P12111 3177 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 RCBTB2O95199 551 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 CBX7O95931 251 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 IGKV1D-16P01601 117 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 HLA-DPB1P04440 258 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 F13BP05160 661 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 PROS1P07225 676 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 RNH1P13489 461 aaKnown RBP8.04□□□□□ -1.12
UBE3B-208ENST00000538070 CPEP16870 476 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 RAB15P59190 212 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 EEF1A1P68104 462 aaKnown RBP8.04□□□□□ -1.12
UBE3B-208ENST00000538070 ZNF321PQ8N8H1 164 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 C19orf47Q8N9M1 422 aaKnown RBP8.04□□□□□ -1.12
UBE3B-208ENST00000538070 FAM174AQ8TBP5 190 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 NT5CQ8TCD5 201 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 ANKRD9Q96BM1 317 aaPredicted RBP8.04□□□□□ -1.12
UBE3B-208ENST00000538070 SLC25A36Q96CQ1 311 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 ELF4Q99607 663 aaPredicted RBP8.04□□□□□ -1.12
UBE3B-208ENST00000538070 LRRC61Q9BV99 259 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 C11orf54Q9H0W9 315 aaPredicted RBP8.04□□□□□ -1.12
UBE3B-208ENST00000538070 MIXL1Q9H2W2 232 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 IL20Q9NYY1 176 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 FLRT3Q9NZU0 649 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 FBXL21Q9UKT6 434 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 TBC1D24Q9ULP9 559 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 MRPS33Q9Y291 106 aaKnown RBP8.04□□□□□ -1.12
UBE3B-208ENST00000538070 TICRRQ7Z2Z1 1910 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 ALPK3Q96L96 1907 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 CACNA1EQ15878 2313 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 SDK2Q58EX2 2172 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 SPTY2D1-AS1A0A0U1RR47 76 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 FAM240BA0A1B0GVZ2 78 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 ISPDA4D126 451 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 TPD52L2O43399 206 aaKnown RBP8.04□□□□□ -1.12
UBE3B-208ENST00000538070 CASP3P42574 277 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 DUSP8Q13202 625 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 ZNF79Q15937 498 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 AADACL4Q5VUY2 407 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 KIAA0895LQ68EN5 471 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 ESPNLQ6ZVH7 1005 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 OR8K3Q8NH51 312 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 RASD2Q96D21 266 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 ADOQ96SZ5 270 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 NMNAT3Q96T66 252 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 GAL3ST1Q99999 423 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 PRSS27Q9BQR3 290 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 ARHGAP9Q9BRR9 750 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 Q9N2J8 555 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 POT1Q9NUX5 634 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 MRPL15Q9P015 296 aaKnown RBP8.04□□□□□ -1.12
UBE3B-208ENST00000538070 EXTL2Q9UBQ6 330 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 PLEKHB1Q9UF11 243 aaPredicted RBP8.04□□□□□ -1.12
UBE3B-208ENST00000538070 A6NCN8 305 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 RHPN2P1A8MT19 583 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 C11orf98E9PRG8 122 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 RAD1O60671 282 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 ZNF3P17036 446 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 TSFMP43897 325 aaKnown RBP8.04□□□□□ -1.12
UBE3B-208ENST00000538070 RPL6Q02878 288 aaKnown RBP8.04□□□□□ -1.12
UBE3B-208ENST00000538070 TBRG1Q3YBR2 411 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 ZNF322Q6U7Q0 402 aaPredicted RBP8.04□□□□□ -1.12
UBE3B-208ENST00000538070 KIRREL2Q6UWL6 708 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 MEPCEQ7L2J0 689 aaKnown RBP8.04□□□□□ -1.12
UBE3B-208ENST00000538070 OR5W2Q8NH69 310 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 SMPDL3BQ92485 455 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 PTP4A1Q93096 173 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 TEAD3Q99594 435 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 PSD2Q9BQI7 771 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 ZNF350Q9GZX5 532 aa8.04□□□□□ -1.12
UBE3B-208ENST00000538070 TP53BP1Q12888 1972 aaPredicted RBP8.03□□□□□ -1.12
UBE3B-208ENST00000538070 C2orf72A6NCS6 295 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 TGFBR3LH3BV60 316 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 HCN1O60741 890 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 PTTG1O95997 202 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 PLGP00747 810 aaPredicted RBP8.03□□□□□ -1.12
UBE3B-208ENST00000538070 AHCYP23526 432 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 HTR1FP30939 366 aa8.03□□□□□ -1.12
UBE3B-208ENST00000538070 PSG6Q00889 435 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms