RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 GRPEL2Q8TAA5 225 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 TRIM63Q969Q1 353 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 CREB3L1Q96BA8 519 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 SPACA6W5XKT8 324 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 SCN2AQ99250 2005 aa13.24□□□□□ -0.29
USP44-203ENST00000537435 A0A0G2JK05 382 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 A6NCN8 305 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 CYR61O00622 381 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 ZNF3P17036 446 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 NPR2P20594 1047 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 RBMS1P29558 406 aaKnown RBP13.23□□□□□ -0.29
USP44-203ENST00000537435 SLC6A1P30531 599 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 ACSL1P33121 698 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 PITPNBP48739 271 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 TAS2R43P59537 309 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 TRAM1Q15629 374 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 SDE2Q6IQ49 451 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 ZCCHC12Q6PEW1 402 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 ZNF613Q6PF04 617 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 GPR135Q8IZ08 494 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 SLC44A3Q8N4M1 653 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 CNOT9Q92600 299 aaKnown RBP13.23□□□□□ -0.29
USP44-203ENST00000537435 PEX11GQ96HA9 241 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 PGLYRP3Q96LB9 341 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 BMFQ96LC9 184 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 NECTIN4Q96NY8 510 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 GABRG3Q99928 467 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 GON7Q9BXV9 100 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 NIPAL2Q9H841 368 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 ERVMER34-1Q9H9K5 563 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 SLC28A3Q9HAS3 691 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 IL21RQ9HBE5 538 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 CD93Q9NPY3 652 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.23□□□□□ -0.29
USP44-203ENST00000537435 A0A1W2PQF6 199 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 SMLR1H3BR10 107 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 AK1P00568 194 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 HOXB2P14652 356 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 MAP3K8P41279 467 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 GALK2Q01415 458 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 MGAT2Q10469 447 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 SLC25A35Q3KQZ1 300 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 FBXO46Q6PJ61 603 aaPredicted RBP13.23□□□□□ -0.29
USP44-203ENST00000537435 ZC3H14Q6PJT7 736 aaKnown RBP13.23□□□□□ -0.29
USP44-203ENST00000537435 SSX6Q7RTT6 188 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 TPRA1Q86W33 373 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 OR5J2Q8NH18 312 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 TRMT10AQ8TBZ6 339 aaKnown RBP13.23□□□□□ -0.29
USP44-203ENST00000537435 AKAP1Q92667 903 aaKnown RBP eCLIP13.23□□□□□ -0.29
USP44-203ENST00000537435 PTCHD1Q96NR3 888 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 TNFRSF13CQ96RJ3 184 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 ZNF559Q9BR84 538 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 TTTY10Q9BZA0 68 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 ABCG5Q9H222 651 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 C14orf105Q9NVL8 296 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 FLRT3Q9NZU0 649 aa13.23□□□□□ -0.29
USP44-203ENST00000537435 A0A0B4J2E0 115 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 A0A1B0GX12 115 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 SLC9B1P1A6NJY1 282 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 EEF1E1O43324 174 aaKnown RBP13.22□□□□□ -0.29
USP44-203ENST00000537435 SC5DO75845 299 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 HK1P19367 917 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 PYCR1P32322 319 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 EVI2BP34910 448 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 LSSP48449 732 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 MAB21L1Q13394 359 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 TNK1Q13470 666 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 ACSM3Q53FZ2 586 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 FAAH2Q6GMR7 532 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 PXKQ7Z7A4 578 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 PLCZ1Q86YW0 608 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 DNAJC5GQ8N7S2 189 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 OR13C5Q8NGS8 318 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 ABHD1Q96SE0 405 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 TWSG1Q9GZX9 223 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 EVA1BQ9NVM1 165 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 A0A1B0GWA3 101 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 CHP2O43745 196 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 ALX3O95076 343 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 NGFRP08138 427 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 PRKCAP17252 672 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 DRD5P21918 477 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 PLA1AQ53H76 456 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 DMKNQ6E0U4 476 aaPredicted RBP13.22□□□□□ -0.29
USP44-203ENST00000537435 OR52R1Q8NGF1 315 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 PATE1Q8WXA2 126 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 ELSPBP1Q96BH3 223 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 SIPA1Q96FS4 1042 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 MTIF3Q9H2K0 278 aaKnown RBP13.22□□□□□ -0.29
USP44-203ENST00000537435 FOLH1BQ9HBA9 442 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 FBXL21Q9UKT6 434 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 DOCK8Q8NF50 2099 aa13.22□□□□□ -0.29
USP44-203ENST00000537435 A0A1W2PRG6 482 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 ARHGEF9O43307 516 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 HYAL3O43820 417 aaPredicted RBP13.21□□□□□ -0.29
USP44-203ENST00000537435 ADAM11O75078 769 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 FZD7O75084 574 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 ZNF780AO75290 641 aaPredicted RBP13.21□□□□□ -0.29
USP44-203ENST00000537435 PEPDP12955 493 aa13.21□□□□□ -0.29
USP44-203ENST00000537435 AHCYP23526 432 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms