RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 EXOSC3Q9NQT5 275 aaKnown RBP11.14□□□□□ -0.63
PRKDC-207ENST00000536483 GLRX2Q9NS18 164 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 SLC35A3Q9Y2D2 325 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 CARD8Q9Y2G2 431 aa11.14□□□□□ -0.63
PRKDC-207ENST00000536483 NPIPA5A0A0B4J1W7 369 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 A0A0J9YW62 118 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 FAM234BA2RU67 622 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 DEFB108AA8MXU0 73 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 SHISA8B8ZZ34 492 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 NPIPA7E9PJI5 369 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 GTPBP1O00178 669 aaKnown RBP11.13□□□□□ -0.63
PRKDC-207ENST00000536483 RFXANKO14593 260 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 KRT75O95678 551 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 NPIPA8P0DM63 369 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 UBL4AP11441 157 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 RPS4Y1P22090 263 aaKnown RBP11.13□□□□□ -0.63
PRKDC-207ENST00000536483 PGM1P36871 562 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 CD79BP40259 229 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 CDKN2CP42773 168 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 IDH3AP50213 366 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 ANXA11P50995 505 aaKnown RBP11.13□□□□□ -0.63
PRKDC-207ENST00000536483 PON3Q15166 354 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 GPR68Q15743 365 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 MAPK14Q16539 360 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 NXNQ6DKJ4 435 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 ZNF474Q6S9Z5 364 aaPredicted RBP11.13□□□□□ -0.63
PRKDC-207ENST00000536483 LRRC74BQ6ZQY2 392 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 EIF3MQ7L2H7 374 aaKnown RBP11.13□□□□□ -0.63
PRKDC-207ENST00000536483 FAM214BQ7L5A3 538 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 C16orf62Q7Z3J2 963 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 BTLAQ7Z6A9 289 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 PRIMA1Q86XR5 153 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 RNF130Q86XS8 419 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 CMIPQ8IY22 773 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 UBQLNLQ8IYU4 475 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 ZNF619Q8N2I2 560 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 MIER2Q8N344 545 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 OR10D3Q8NH80 312 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 OR2V1Q8NHB1 315 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 FNDC9Q8TBE3 224 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 CKAP2Q8WWK9 683 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 ST8SIA1Q92185 356 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 RAB8BQ92930 207 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 ZNF524Q96C55 264 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 ZG16BQ96DA0 208 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 ZNF845Q96IR2 970 aaPredicted RBP11.13□□□□□ -0.63
PRKDC-207ENST00000536483 Q96MF0 132 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 MED18Q9BUE0 208 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 PINK1Q9BXM7 581 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 OPN3Q9H1Y3 402 aaPredicted RBP11.13□□□□□ -0.63
PRKDC-207ENST00000536483 SLC38A1Q9H2H9 487 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 CCDC134Q9H6E4 229 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 MTHFD2LQ9H903 347 aaPredicted RBP11.13□□□□□ -0.63
PRKDC-207ENST00000536483 UBTD1Q9HAC8 227 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 GP6Q9HCN6 339 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 SLC52A3Q9NQ40 469 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 TCF7L2Q9NQB0 619 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 PLSCR4Q9NRQ2 329 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 ZNF226Q9NYT6 803 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 MKLN1Q9UL63 735 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 WDR45Q9Y484 360 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 TLN2Q9Y4G6 2542 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 CSPG4Q6UVK1 2322 aa11.13□□□□□ -0.63
PRKDC-207ENST00000536483 CENPVL1A0A0U1RR11 272 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 AGAP5A6NIR3 686 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 GJE1A6NN92 205 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 FAAHO00519 579 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 SMAD7O15105 426 aaKnown RBP11.12□□□□□ -0.63
PRKDC-207ENST00000536483 SS18L1O75177 396 aaPredicted RBP11.12□□□□□ -0.63
PRKDC-207ENST00000536483 AQP8O94778 261 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 C1QCP02747 245 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 BMP2P12643 396 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 HOXB9P17482 250 aaPredicted RBP11.12□□□□□ -0.63
PRKDC-207ENST00000536483 ME2P23368 584 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 PCSK6P29122 969 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 CHI3L1P36222 383 aaPredicted RBP11.12□□□□□ -0.63
PRKDC-207ENST00000536483 ATP4BP51164 291 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 POLR2JP52435 117 aaKnown RBP11.12□□□□□ -0.63
PRKDC-207ENST00000536483 NME5P56597 212 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 SIRPAP78324 504 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 KCNJ10P78508 379 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 PLAURQ03405 335 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 CBFBQ13951 182 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 MAPK11Q15759 364 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 TOMM34Q15785 309 aaPredicted RBP11.12□□□□□ -0.63
PRKDC-207ENST00000536483 ACKR1Q16570 336 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 PDSS1Q5T2R2 415 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 TNFAIP8L2Q6P589 184 aaPredicted RBP11.12□□□□□ -0.63
PRKDC-207ENST00000536483 ZNF621Q6ZSS3 439 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 ZNF550Q7Z398 422 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 YTHDF3Q7Z739 585 aaKnown RBP11.12□□□□□ -0.63
PRKDC-207ENST00000536483 LILRA2Q8N149 483 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 FBXO27Q8NI29 283 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 BCAS4Q8TDM0 211 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 GTF2H4Q92759 462 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 PERPQ96FX8 193 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 GMPPAQ96IJ6 420 aaPredicted RBP11.12□□□□□ -0.63
PRKDC-207ENST00000536483 ITCHQ96J02 903 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 MAGEB18Q96M61 343 aa11.12□□□□□ -0.63
PRKDC-207ENST00000536483 KLHL15Q96M94 604 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms