RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 MTHFD2LQ9H903 347 aaPredicted RBP11.79□□□□□ -0.52
PRKDC-206ENST00000536429 RLIMQ9NVW2 624 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 GALNT8Q9NY28 637 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 VAPAQ9P0L0 249 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 P2RX2Q9UBL9 471 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 PACSIN3Q9UKS6 424 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 DSPPQ9NZW4 1301 aa11.79□□□□□ -0.52
PRKDC-206ENST00000536429 SPG11Q96JI7 2443 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 HEATR5AQ86XA9 2040 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 A0A1W2PP18 115 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 A8MXE2 369 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 SMNDC1O75940 238 aaKnown RBP eCLIP11.78□□□□□ -0.52
PRKDC-206ENST00000536429 CGAP01215 116 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 SSTR2P30874 369 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 MAGEA8P43361 318 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 KIR2DL3P43628 341 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 CARD18P57730 90 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 MERTKQ12866 999 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 MYBPHQ13203 477 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 MRPL2Q5T653 305 aaKnown RBP11.78□□□□□ -0.52
PRKDC-206ENST00000536429 OR2A2Q6IF42 318 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 ZNF474Q6S9Z5 364 aaPredicted RBP11.78□□□□□ -0.52
PRKDC-206ENST00000536429 DLEU7Q6UYE1 221 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 ZNF836Q6ZNA1 936 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 PLEKHM3Q6ZWE6 761 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 RETREG3Q86VR2 466 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 LINC01560Q8TB33 94 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 WDR60Q8WVS4 1066 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 OIT3Q8WWZ8 545 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 ST8SIA1Q92185 356 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 DNAJA3Q96EY1 480 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 EXOSC3Q9NQT5 275 aaKnown RBP11.78□□□□□ -0.52
PRKDC-206ENST00000536429 ACER3Q9NUN7 267 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 STOML1Q9UBI4 398 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 CHST2Q9Y4C5 530 aa11.78□□□□□ -0.52
PRKDC-206ENST00000536429 MYO9AB2RTY4 2548 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 IGHV3-15A0A0B4J1V0 119 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 SYNGR4O95473 234 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 CRHP06850 196 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 DBIP07108 87 aaKnown RBP11.77□□□□□ -0.53
PRKDC-206ENST00000536429 VIMP08670 466 aaKnown RBP11.77□□□□□ -0.53
PRKDC-206ENST00000536429 GKN3PP0CG01 181 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 BMP2P12643 396 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 IL7RP16871 459 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 PGCP20142 388 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 CPOXP36551 454 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 CPA2P48052 419 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 IDH2P48735 452 aaKnown RBP11.77□□□□□ -0.53
PRKDC-206ENST00000536429 CRISP3P54108 245 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 EEF1A1P68104 462 aaKnown RBP11.77□□□□□ -0.53
PRKDC-206ENST00000536429 SELENBP1Q13228 472 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 ZNF239Q16600 458 aaKnown RBP11.77□□□□□ -0.53
PRKDC-206ENST00000536429 CLIP4Q8N3C7 705 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 ARFGAP2Q8N6H7 521 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 OR52P1PQ8NH57 321 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 ZNF563Q8TA94 476 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 ABHD3Q8WU67 409 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 ZNF559Q9BR84 538 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 SIKE1Q9BRV8 207 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 CCDC106Q9BWC9 280 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 PRRG4Q9BZD6 226 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 PIGMQ9H3S5 423 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 MCCC2Q9HCC0 563 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 A4GALTQ9NPC4 353 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 CTPS2Q9NRF8 586 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 TMEM45AQ9NWC5 275 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 KCNN3Q9UGI6 736 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 MCTS1Q9ULC4 181 aaKnown RBP11.77□□□□□ -0.53
PRKDC-206ENST00000536429 ZNF443Q9Y2A4 671 aaPredicted RBP11.77□□□□□ -0.53
PRKDC-206ENST00000536429 CCDC168Q8NDH2 2452 aa11.77□□□□□ -0.53
PRKDC-206ENST00000536429 OTOGQ6ZRI0 2925 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 MSTNO14793 375 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 SS18L1O75177 396 aaPredicted RBP11.76□□□□□ -0.53
PRKDC-206ENST00000536429 FCGR2AP12318 317 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 ENPP1P22413 925 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 IRX1P78414 480 aaPredicted RBP11.76□□□□□ -0.53
PRKDC-206ENST00000536429 FAM27E3Q08E93 113 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 EPS8Q12929 822 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 SELPLGQ14242 412 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 HSP90B2PQ58FF3 399 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 C3orf33Q6P1S2 294 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 FAM214BQ7L5A3 538 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 COMTD1Q86VU5 262 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 CMIPQ8IY22 773 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 PEX5LQ8IYB4 626 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 ZNF610Q8N9Z0 462 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 NFKBIDQ8NI38 313 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 RNF128Q8TEB7 428 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 OR5B2Q96R09 309 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 CPPED1Q9BRF8 314 aaPredicted RBP11.76□□□□□ -0.53
PRKDC-206ENST00000536429 RABEP2Q9H5N1 569 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 MED4Q9NPJ6 270 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 PAQR5Q9NXK6 330 aaPredicted RBP11.76□□□□□ -0.53
PRKDC-206ENST00000536429 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.76□□□□□ -0.53
PRKDC-206ENST00000536429 FOXD3Q9UJU5 478 aaPredicted RBP11.76□□□□□ -0.53
PRKDC-206ENST00000536429 TRIM33Q9UPN9 1127 aa11.76□□□□□ -0.53
PRKDC-206ENST00000536429 CDHR4A6H8M9 788 aa11.75□□□□□ -0.53
PRKDC-206ENST00000536429 CFAP73A6NFT4 308 aa11.75□□□□□ -0.53
PRKDC-206ENST00000536429 GJE1A6NN92 205 aa11.75□□□□□ -0.53
PRKDC-206ENST00000536429 FRS3O43559 492 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms