RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 DNAJB12Q9NXW2 375 aaKnown RBP12.76□□□□□ -0.37
UBE3B-206ENST00000536398 SLC25A37Q9NYZ2 338 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 MCTS1Q9ULC4 181 aaKnown RBP12.76□□□□□ -0.37
UBE3B-206ENST00000536398 LIPT1Q9Y234 373 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 SLC35A3Q9Y2D2 325 aa12.76□□□□□ -0.37
UBE3B-206ENST00000536398 OTOGQ6ZRI0 2925 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 NR5A2O00482 541 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 SS18L1O75177 396 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-206ENST00000536398 TFPTP0C1Z6 253 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 FCGR2AP12318 317 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 HOXB9P17482 250 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-206ENST00000536398 RPS4Y1P22090 263 aaKnown RBP12.75□□□□□ -0.37
UBE3B-206ENST00000536398 ENPP1P22413 925 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 PEX19P40855 299 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 STX1BP61266 288 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 MERTKQ12866 999 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 DAZAP2Q15038 168 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-206ENST00000536398 ZNF239Q16600 458 aaKnown RBP12.75□□□□□ -0.37
UBE3B-206ENST00000536398 RPS26P11Q5JNZ5 115 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-206ENST00000536398 PAGE3Q5JUK9 113 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 PDSS1Q5T2R2 415 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 PLEKHM3Q6ZWE6 761 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 CDH24Q86UP0 819 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 MSRB3Q8IXL7 192 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 ABHD3Q8WU67 409 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 SLC38A5Q8WUX1 472 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 DNAJA3Q96EY1 480 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 POLDIP3Q9BY77 421 aaKnown RBP12.75□□□□□ -0.37
UBE3B-206ENST00000536398 MTHFD2LQ9H903 347 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-206ENST00000536398 RASSF1Q9NS23 344 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 ACER3Q9NUN7 267 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 PAQR5Q9NXK6 330 aaPredicted RBP12.75□□□□□ -0.37
UBE3B-206ENST00000536398 CCDC167Q9P0B6 97 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 DCTN4Q9UJW0 460 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 PROCRQ9UNN8 238 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 MYO9AB2RTY4 2548 aa12.75□□□□□ -0.37
UBE3B-206ENST00000536398 SH3D21A4FU49 640 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 EDF1O60869 148 aaKnown RBP12.74□□□□□ -0.37
UBE3B-206ENST00000536398 PLGP00747 810 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-206ENST00000536398 CD8BP10966 210 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 PGCP20142 388 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 CD79BP40259 229 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 ANXA11P50995 505 aaKnown RBP12.74□□□□□ -0.37
UBE3B-206ENST00000536398 DSTNP60981 165 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 TXNL4AP83876 142 aaKnown RBP12.74□□□□□ -0.37
UBE3B-206ENST00000536398 SELENBP1Q13228 472 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 POU4F3Q15319 338 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 EXOC3L2Q2M3D2 409 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 AGKQ53H12 422 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 C22orf34Q6ZV56 151 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 VRK2Q86Y07 508 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 C10orf111Q8N326 155 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 ARFGAP2Q8N6H7 521 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 ZNF563Q8TA94 476 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 OIT3Q8WWZ8 545 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 ST8SIA1Q92185 356 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 MAL2Q969L2 176 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 SPDL1Q96EA4 605 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 GMPPAQ96IJ6 420 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-206ENST00000536398 WFIKKN1Q96NZ8 548 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 CCDC106Q9BWC9 280 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 CLEC4MQ9H2X3 399 aaPredicted RBP12.74□□□□□ -0.37
UBE3B-206ENST00000536398 NPHS2Q9NP85 383 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 CTPS2Q9NRF8 586 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 PLSCR4Q9NRQ2 329 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 RLIMQ9NVW2 624 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 P2RX2Q9UBL9 471 aa12.74□□□□□ -0.37
UBE3B-206ENST00000536398 ANKHD1Q8IWZ3 2542 aaKnown RBP12.73□□□□□ -0.37
UBE3B-206ENST00000536398 SPG11Q96JI7 2443 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 A0A096LPI6 279 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 GJE1A6NN92 205 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 ENO4A6NNW6 628 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 CLIC1O00299 241 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 BCHEP06276 602 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 GKN3PP0CG01 181 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 POU2F1P14859 743 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 CCNA2P20248 432 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 AGTR1P30556 359 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 SLC7A1P30825 629 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 CCKARP32238 428 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 UGT2B10P36537 528 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 KCNJ5P48544 419 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 IDH2P48735 452 aaKnown RBP12.73□□□□□ -0.37
UBE3B-206ENST00000536398 CTBP2P56545 445 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 SF3A3Q12874 501 aaKnown RBP eCLIP12.73□□□□□ -0.37
UBE3B-206ENST00000536398 RGNQ15493 299 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 MRPL2Q5T653 305 aaKnown RBP12.73□□□□□ -0.37
UBE3B-206ENST00000536398 ANKRD34AQ69YU3 496 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 ZNF550Q7Z398 422 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 NUFIP2Q7Z417 695 aaKnown RBP12.73□□□□□ -0.37
UBE3B-206ENST00000536398 CDC20BQ86Y33 519 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 ADGRG3Q86Y34 549 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 TUSC5Q8IXB3 177 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 OR6K3Q8NGY3 331 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 OR52P1PQ8NH57 321 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 RNF128Q8TEB7 428 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 WDR60Q8WVS4 1066 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 CPNE4Q96A23 557 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-206ENST00000536398 TMEM19Q96HH6 336 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 DACH2Q96NX9 599 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms