RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 NINQ8N4C6 2090 aa13□□□□□ -0.33
LIG1-203ENST00000536218 NUP210Q8TEM1 1887 aaPredicted RBP13□□□□□ -0.33
LIG1-203ENST00000536218 PLSCR5A0PG75 271 aa13□□□□□ -0.33
LIG1-203ENST00000536218 OR2W5A6NFC9 320 aa13□□□□□ -0.33
LIG1-203ENST00000536218 HTR3BO95264 441 aa13□□□□□ -0.33
LIG1-203ENST00000536218 SNTB2Q13425 540 aaKnown RBP13□□□□□ -0.33
LIG1-203ENST00000536218 RGNQ15493 299 aa13□□□□□ -0.33
LIG1-203ENST00000536218 ANXA8L1Q5VT79 327 aa13□□□□□ -0.33
LIG1-203ENST00000536218 ABCG4Q9H172 646 aa13□□□□□ -0.33
LIG1-203ENST00000536218 CA10Q9NS85 328 aa13□□□□□ -0.33
LIG1-203ENST00000536218 NTMQ9P121 344 aa13□□□□□ -0.33
LIG1-203ENST00000536218 KCNK7Q9Y2U2 307 aa13□□□□□ -0.33
LIG1-203ENST00000536218 VCANP13611 3396 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 VEGFCP49767 419 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 DGCR2P98153 550 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 MSANTD1Q6ZTZ1 278 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 TMUB2Q71RG4 321 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 KRT78Q8N1N4 520 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 OR5K2Q8NHB8 316 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 ART5Q96L15 291 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 INSM2Q96T92 566 aaPredicted RBP12.99□□□□□ -0.33
LIG1-203ENST00000536218 SLC35A5Q9BS91 424 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 POLR2J3Q9H1A7 115 aaKnown RBP12.99□□□□□ -0.33
LIG1-203ENST00000536218 PTGFRNQ9P2B2 879 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 CA5BQ9Y2D0 317 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 TRBV23OR9-2A0A075B6M9 112 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 K7EQS6 105 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 PPM1DO15297 605 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 OR1F1O43749 312 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 IGF2P01344 180 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 OSMP13725 252 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 C5AR1P21730 350 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 HSD17B2P37059 387 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 PSMA6P60900 246 aaKnown RBP12.99□□□□□ -0.33
LIG1-203ENST00000536218 ZNF124Q15973 351 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 METTL11BQ5VVY1 283 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 KLHDC8AQ8IYD2 350 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 MEIOBQ8N635 442 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 OR5M3Q8NGP4 307 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 OR10K1Q8NGX5 313 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 FUZQ9BT04 418 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 PTDSS2Q9BVG9 487 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 PRDM9Q9NQV7 894 aa12.99□□□□□ -0.33
LIG1-203ENST00000536218 MYEF2Q9P2K5 600 aaKnown RBP12.99□□□□□ -0.33
LIG1-203ENST00000536218 FOXE1O00358 373 aaPredicted RBP12.98□□□□□ -0.33
LIG1-203ENST00000536218 STK25O00506 426 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 GATCO43716 136 aaKnown RBP12.98□□□□□ -0.33
LIG1-203ENST00000536218 SUSD5O60279 629 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 FURINP09958 794 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 ANKRD34CP0C6C1 535 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 BTF3P20290 206 aaKnown RBP12.98□□□□□ -0.33
LIG1-203ENST00000536218 TPBGQ13641 420 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 SLC36A2Q495M3 483 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 GSG1LQ6UXU4 331 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 SETD7Q8WTS6 366 aaKnown RBP12.98□□□□□ -0.33
LIG1-203ENST00000536218 PHPT1Q9NRX4 125 aaPredicted RBP12.98□□□□□ -0.33
LIG1-203ENST00000536218 CYSLTR2Q9NS75 346 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 GPN3Q9UHW5 284 aaPredicted RBP12.98□□□□□ -0.33
LIG1-203ENST00000536218 GPR52Q9Y2T5 361 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 TRDV1A0A1B0GX56 115 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 FZD7O75084 574 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 RECKO95980 971 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 HLA-DPB1P04440 258 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 IFNA4P05014 189 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 RFC3P40938 356 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 SSTP61278 116 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 ZNF776Q68DI1 518 aaPredicted RBP12.98□□□□□ -0.33
LIG1-203ENST00000536218 NHLRC1Q6VVB1 395 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 LRRC28Q86X40 367 aaPredicted RBP12.98□□□□□ -0.33
LIG1-203ENST00000536218 OR56B4Q8NH76 319 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 WDR77Q9BQA1 342 aaPredicted RBP12.98□□□□□ -0.33
LIG1-203ENST00000536218 SPATA5L1Q9BVQ7 753 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 SLC17A9Q9BYT1 436 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 SLC6A16Q9GZN6 736 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 C20orf85Q9H1P6 137 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 RASD1Q9Y272 281 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 OR10H1Q9Y4A9 318 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 TRIOO75962 3097 aa12.98□□□□□ -0.33
LIG1-203ENST00000536218 TRBC2A0A5B9 178 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 C1orf226A1L170 272 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 TMEM200CA6NKL6 621 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 KLHL18O94889 574 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 CRYBA1P05813 215 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 CLDN2P57739 230 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 TMEM196Q5HYL7 178 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 ZCCHC12Q6PEW1 402 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 LCTLQ6UWM7 567 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 BTN2A1Q7KYR7 527 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 FAM129CQ86XR2 697 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 LINC01555Q8NAE3 123 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 PXT1Q8NFP0 134 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 AIF1LQ9BQI0 150 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 GPATCH2Q9NW75 528 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 MED11Q9P086 117 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 LHX6Q9UPM6 363 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 A0A1W2PRB8 838 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 OR6C68A6NDL8 312 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 PLPP1O14494 284 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 TXNL1O43396 289 aa12.97□□□□□ -0.33
LIG1-203ENST00000536218 PEX14O75381 377 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms