RNA–Protein interactions for RNA: ENST00000534716.2

NDUFS3-213, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 2 BASIC

Gene NDUFS3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-213ENST00000534716 ENPP1P22413 925 aa16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 SLC7A1P30825 629 aa16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 PGM1P36871 562 aa16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 P2RY6Q15077 328 aa16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 MAPK14Q16539 360 aa16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 TIGD2Q4W5G0 525 aa16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 SFRP5Q5T4F7 317 aa16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 ATAD3BQ5T9A4 648 aa16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 ZNF704Q6ZNC4 412 aaPredicted RBP16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 PLEKHM3Q6ZWE6 761 aa16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 ANKRD46Q86W74 232 aa16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 RFWD2Q8NHY2 731 aa16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 TMEM234Q8WY98 164 aa16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 PSD2Q9BQI7 771 aa16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 NUF2Q9BZD4 464 aa16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 KLHL9Q9P2J3 617 aa16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 SLC35A3Q9Y2D2 325 aa16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 RAI1Q7Z5J4 1906 aaPredicted RBP16.74■□□□□ 0.27
NDUFS3-213ENST00000534716 NSD1Q96L73 2696 aaPredicted RBP16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 FAM171A2A8MVW0 826 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 E9PBE3 544 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 CYTIPO60759 359 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 OR12D1P0DN82 309 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 CCR4P51679 360 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 SESN3P58005 492 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 TXNL4AP83876 142 aaKnown RBP16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 SPANXN4Q5MJ08 99 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 CEP85LQ5SZL2 805 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 TYW3Q6IPR3 259 aaKnown RBP16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 ATP6V1C2Q8NEY4 427 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 XAGE5Q8WWM1 108 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 HSD17B8Q92506 261 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 S100PBPQ96BU1 408 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 PLPPR2Q96GM1 343 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 CCDC115Q96NT0 180 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 SERINC1Q9NRX5 453 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 BTNL2Q9UIR0 455 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 WDR45Q9Y484 360 aa16.73■□□□□ 0.27
NDUFS3-213ENST00000534716 NAV3Q8IVL0 2385 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 A0A1W2PNR3 127 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 ZNF724A8MTY0 619 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 ZNF814B7Z6K7 855 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 SMAD9O15198 467 aaKnown RBP16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 H6PDO95479 791 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 UBTFL6P0CB48 400 aaPredicted RBP16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 FKBP2P26885 142 aaKnown RBP16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 APOBEC1P41238 236 aaKnown RBP16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 KHKP50053 298 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 BST1Q10588 318 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 FUT5Q11128 374 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 ADAM5Q6NVV9 412 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 TNFAIP8L2Q6P589 184 aaPredicted RBP16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 FRRS1Q6ZNA5 592 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 TMPPEQ6ZT21 453 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 Q6ZT83 130 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 OLIG3Q7RTU3 272 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 WFDC8Q8IUA0 241 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 ZNF611Q8N823 705 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 SLC25A43Q8WUT9 341 aaPredicted RBP16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 ZNF75CPQ92670 426 aaPredicted RBP16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 ROPN1LQ96C74 230 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 COX4I2Q96KJ9 171 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 OR5B2Q96R09 309 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 SMR3AQ99954 134 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 CCDC106Q9BWC9 280 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 QRSL1Q9H0R6 528 aaKnown RBP16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 KCNK9Q9NPC2 374 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 EXOSC3Q9NQT5 275 aaKnown RBP16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 ZNF701Q9NV72 531 aaPredicted RBP16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 PNPOQ9NVS9 261 aa16.72■□□□□ 0.27
NDUFS3-213ENST00000534716 HS3ST1O14792 307 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 CYP7B1O75881 506 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 CPSF4O95639 269 aaKnown RBP16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 PLAUP00749 431 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 ALDOCP09972 364 aaKnown RBP16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 ADSLP30566 484 aaPredicted RBP16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 S100A3P33764 101 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 OR3A2P47893 321 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 CASP9P55211 416 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 CSNK2A1P68400 391 aaPredicted RBP16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 LRRC74AQ0VAA2 488 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 RASGEF1BQ0VAM2 473 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 MERTKQ12866 999 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 ITGADQ13349 1161 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 PDK3Q15120 406 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 FAM174BQ3ZCQ3 159 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 SPATA19Q7Z5L4 167 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 YTHDF3Q7Z739 585 aaKnown RBP16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 ZNF619Q8N2I2 560 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 RAB8BQ92930 207 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 TEX37Q96LM6 180 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 SLC35A5Q9BS91 424 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 CENPHQ9H3R5 247 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 AIG1Q9NVV5 245 aa16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 MARCOQ9UEW3 520 aaPredicted RBP16.71■□□□□ 0.27
NDUFS3-213ENST00000534716 IGHV3-15A0A0B4J1V0 119 aa16.7■□□□□ 0.26
NDUFS3-213ENST00000534716 PRAMEF27A3QJZ7 478 aa16.7■□□□□ 0.26
NDUFS3-213ENST00000534716 HMGN4O00479 90 aa16.7■□□□□ 0.26
NDUFS3-213ENST00000534716 SDHDO14521 159 aa16.7■□□□□ 0.26
NDUFS3-213ENST00000534716 SNNO75324 88 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms