RNA–Protein interactions for RNA: ENST00000534382.5

CTSB-231, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-231ENST00000534382 SFTPDP35247 375 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 DLX5P56178 289 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 CARD18P57730 90 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 SELENBP1Q13228 472 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 TMEM176BQ3YBM2 270 aaPredicted RBP13.03□□□□□ -0.32
CTSB-231ENST00000534382 LIN52Q52LA3 116 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 RPS26P11Q5JNZ5 115 aaPredicted RBP13.03□□□□□ -0.32
CTSB-231ENST00000534382 MRPL2Q5T653 305 aaKnown RBP13.03□□□□□ -0.32
CTSB-231ENST00000534382 PRAMEF8Q5VWM4 474 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 PRAMEF7Q5VXH5 474 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 HBMQ6B0K9 141 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 RETREG3Q86VR2 466 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 VRK2Q86Y07 508 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 DPP10Q8N608 796 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 ATP6V1C2Q8NEY4 427 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 OR52P1PQ8NH57 321 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 ZNF563Q8TA94 476 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 OSTF1Q92882 214 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 RNASE6Q93091 150 aaKnown RBP13.03□□□□□ -0.32
CTSB-231ENST00000534382 MAL2Q969L2 176 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 PRRG4Q9BZD6 226 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 PIGMQ9H3S5 423 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 BCL2L10Q9HD36 194 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 SERINC1Q9NRX5 453 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 DNAJB12Q9NXW2 375 aaKnown RBP13.03□□□□□ -0.32
CTSB-231ENST00000534382 JKAMPQ9P055 326 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 KLHL14Q9P2G3 628 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 FOXD3Q9UJU5 478 aaPredicted RBP13.03□□□□□ -0.32
CTSB-231ENST00000534382 MCTS1Q9ULC4 181 aaKnown RBP13.03□□□□□ -0.32
CTSB-231ENST00000534382 ZNF232Q9UNY5 417 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 MED12LQ86YW9 2145 aa13.03□□□□□ -0.32
CTSB-231ENST00000534382 ADGRG4Q8IZF6 3080 aa13.02□□□□□ -0.32
CTSB-231ENST00000534382 NOTCH2Q04721 2471 aa13.02□□□□□ -0.32
CTSB-231ENST00000534382 ADAM11O75078 769 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 TNFSF13O75888 250 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 AQP8O94778 261 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 SYNGR4O95473 234 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 MERTKQ12866 999 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 LARS2Q15031 903 aaKnown RBP13.02□□□□□ -0.33
CTSB-231ENST00000534382 RUNDC3AQ59EK9 446 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 GCNT6Q5T4J0 391 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 PPP4R4Q6NUP7 873 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 C3orf33Q6P1S2 294 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 PLEKHM3Q6ZWE6 761 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 DHDDSQ86SQ9 333 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 ZNF440Q8IYI8 595 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 ZNF295-AS1Q8N0V1 137 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 C10orf111Q8N326 155 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 CGREF1Q99674 301 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 CPPED1Q9BRF8 314 aaPredicted RBP13.02□□□□□ -0.33
CTSB-231ENST00000534382 TRIM8Q9BZR9 551 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 IKZF5Q9H5V7 419 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 CACYBPQ9HB71 228 aaKnown RBP13.02□□□□□ -0.33
CTSB-231ENST00000534382 SLC24A3Q9HC58 644 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 TIGARQ9NQ88 270 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 SAR1AQ9NR31 198 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 RLIMQ9NVW2 624 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 PACSIN3Q9UKS6 424 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 IFT52Q9Y366 437 aa13.02□□□□□ -0.33
CTSB-231ENST00000534382 CENPEQ02224 2701 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 CDHR4A6H8M9 788 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 CFAP73A6NFT4 308 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 C5orf58C9J3I9 102 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 FAAHO00519 579 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 PGM3O95394 542 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 THBS1P07996 1170 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 ARAFP10398 606 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 UQCRC1P31930 480 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 PEX19P40855 299 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 APOBEC1P41238 236 aaKnown RBP13.01□□□□□ -0.33
CTSB-231ENST00000534382 KIR2DL2P43627 348 aaPredicted RBP13.01□□□□□ -0.33
CTSB-231ENST00000534382 IDH2P48735 452 aaKnown RBP13.01□□□□□ -0.33
CTSB-231ENST00000534382 KLF10Q13118 480 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 NFYCQ13952 458 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 ZSWIM7Q19AV6 140 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 RNF220Q5VTB9 566 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 ZNF836Q6ZNA1 936 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 GRINAQ7Z429 371 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 GDF7Q7Z4P5 450 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 CNEP1R1Q8N9A8 125 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 NFKBIDQ8NI38 313 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 BBS10Q8TAM1 723 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 C10orf82Q8WW14 230 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 CPNE4Q96A23 557 aaPredicted RBP13.01□□□□□ -0.33
CTSB-231ENST00000534382 STARD4Q96DR4 205 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 ANKRD27Q96NW4 1050 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 CCDC106Q9BWC9 280 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 TMEM38AQ9H6F2 299 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 ARMC7Q9H6L4 198 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 CTPS2Q9NRF8 586 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 PRDM4Q9UKN5 801 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 ZNF443Q9Y2A4 671 aaPredicted RBP13.01□□□□□ -0.33
CTSB-231ENST00000534382 CRYBG3Q68DQ2 2970 aa13.01□□□□□ -0.33
CTSB-231ENST00000534382 NAV2Q8IVL1 2488 aa13□□□□□ -0.33
CTSB-231ENST00000534382 A8MXE2 369 aa13□□□□□ -0.33
CTSB-231ENST00000534382 FBP2O00757 339 aa13□□□□□ -0.33
CTSB-231ENST00000534382 AP3D1O14617 1153 aa13□□□□□ -0.33
CTSB-231ENST00000534382 MSTNO14793 375 aa13□□□□□ -0.33
CTSB-231ENST00000534382 PABPC4LP0CB38 370 aaKnown RBP13□□□□□ -0.33
CTSB-231ENST00000534382 UQCRBP14927 111 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms