RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 ANKDD1BA6NHY2 528 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 CLCA1A8K7I4 914 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 EFCAB9A8MZ26 197 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 M0R3G1 203 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 HMGN4O00479 90 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 HAT1O14929 419 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 SLC25A12O75746 678 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 MFN2O95140 757 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 GADD45GO95257 159 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 SOX14O95416 240 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 CDK1P06493 297 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 ADORA3P0DMS8 318 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 DRD2P14416 443 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 UQCRC2P22695 453 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 CHMP24386 653 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 HMGA2P52926 109 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 MANFP55145 182 aaKnown RBP7.54□□□□□ -1.2
NEDD8-207ENST00000533242 PHEXP78562 749 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 DUSP2Q05923 314 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 BCDIN3DQ7Z5W3 292 aaKnown RBP7.54□□□□□ -1.2
NEDD8-207ENST00000533242 ZNF554Q86TJ5 538 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 CD163Q86VB7 1156 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 PIP4P2Q8N4L2 257 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 OR6Q1Q8NGQ2 317 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 MTERF3Q96E29 417 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 NEURL3Q96EH8 262 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 VMP1Q96GC9 406 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 OR5M11Q96RB7 305 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 LPAR4Q99677 370 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 OR51E2Q9H255 320 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 CDCP1Q9H5V8 836 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 POLE4Q9NR33 117 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 MS4A12Q9NXJ0 267 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 OSGIN1Q9UJX0 560 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 MAPRE3Q9UPY8 281 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 POFUT2Q9Y2G5 429 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 TSC22D4Q9Y3Q8 395 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 DCHS2Q6V1P9 2916 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 ITPR3Q14573 2671 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 SCN3AQ9NY46 2000 aa7.54□□□□□ -1.2
NEDD8-207ENST00000533242 FAM90A27PA6NNH2 459 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 OR1F1O43749 312 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 EPPINO95925 133 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 TPOP07202 933 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 ANXA8P13928 327 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 ZNF12P17014 697 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 KLK2P20151 261 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 REEP5Q00765 189 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 LRRC74AQ0VAA2 488 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 ST3GAL4Q11206 333 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 TBCEQ15813 527 aaPredicted RBP7.53□□□□□ -1.2
NEDD8-207ENST00000533242 SYPL1Q16563 259 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 C10orf62Q5T681 223 aaPredicted RBP7.53□□□□□ -1.2
NEDD8-207ENST00000533242 REEP3Q6NUK4 255 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 IKBIPQ70UQ0 350 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 C6orf120Q7Z4R8 191 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 RPS19BP1Q86WX3 136 aaKnown RBP7.53□□□□□ -1.2
NEDD8-207ENST00000533242 ARMC8Q8IUR7 673 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 SVOPQ8N4V2 548 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 B3GNT7Q8NFL0 401 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 VANGL1Q8TAA9 524 aaPredicted RBP7.53□□□□□ -1.2
NEDD8-207ENST00000533242 IPCEF1Q8WWN9 437 aaPredicted RBP7.53□□□□□ -1.2
NEDD8-207ENST00000533242 LZICQ8WZA0 190 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 RND1Q92730 232 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 ITPAQ9BY32 194 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 TP63Q9H3D4 680 aaPredicted RBP7.53□□□□□ -1.2
NEDD8-207ENST00000533242 ANKRA2Q9H9E1 313 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 CCNB1IP1Q9NPC3 277 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 PLCXD1Q9NUJ7 323 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 TBCCD1Q9NVR7 557 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 HCN3Q9P1Z3 774 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 REV1Q9UBZ9 1251 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 KLF13Q9Y2Y9 288 aaPredicted RBP7.53□□□□□ -1.2
NEDD8-207ENST00000533242 A0A1B0GTH9 108 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 ZAR1LA6NP61 321 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 PDPK1O15530 556 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 NDUFS4O43181 175 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 CCNB2O95067 398 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 NTN1O95631 604 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 KRT75O95678 551 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 SERPIND1P05546 499 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 FOSL1P15407 271 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 POU1F1P28069 291 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 TRHRP34981 398 aaPredicted RBP7.53□□□□□ -1.2
NEDD8-207ENST00000533242 BCL6P41182 706 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 FRKP42685 505 aaPredicted RBP7.53□□□□□ -1.2
NEDD8-207ENST00000533242 MEOX1P50221 254 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 SLC26A5P58743 744 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 RHAGQ02094 409 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 TP53BP2Q13625 1128 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 TIGD6Q17RP2 521 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 RGS21Q2M5E4 152 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 PAGE2Q7Z2X7 111 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 ADCK2Q7Z695 626 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 MEX3DQ86XN8 651 aaKnown RBP7.53□□□□□ -1.2
NEDD8-207ENST00000533242 SHISA5Q8N114 240 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 KRT78Q8N1N4 520 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 ZNF675Q8TD23 568 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 ELP5Q8TE02 316 aa7.53□□□□□ -1.2
NEDD8-207ENST00000533242 CREB3L4Q8TEY5 395 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms