RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 PLGP00747 810 aaPredicted RBP20.58■□□□□ 0.89
CAPN1-222ENST00000532285 DBIP07108 87 aaKnown RBP20.58■□□□□ 0.89
CAPN1-222ENST00000532285 IL7RP16871 459 aa20.58■□□□□ 0.89
CAPN1-222ENST00000532285 RPS4Y1P22090 263 aaKnown RBP20.58■□□□□ 0.89
CAPN1-222ENST00000532285 SESN3P58005 492 aa20.58■□□□□ 0.89
CAPN1-222ENST00000532285 AGKQ53H12 422 aa20.58■□□□□ 0.89
CAPN1-222ENST00000532285 GTF2IRD2BQ6EKJ0 949 aa20.58■□□□□ 0.89
CAPN1-222ENST00000532285 GTF2IRD2Q86UP8 949 aa20.58■□□□□ 0.89
CAPN1-222ENST00000532285 PEX5LQ8IYB4 626 aa20.58■□□□□ 0.89
CAPN1-222ENST00000532285 ATP6V1C2Q8NEY4 427 aa20.58■□□□□ 0.89
CAPN1-222ENST00000532285 CPNE4Q96A23 557 aaPredicted RBP20.58■□□□□ 0.89
CAPN1-222ENST00000532285 THOC1Q96FV9 657 aaKnown RBP20.58■□□□□ 0.89
CAPN1-222ENST00000532285 REXO5Q96IC2 774 aaKnown RBP20.58■□□□□ 0.89
CAPN1-222ENST00000532285 RABEP2Q9H5N1 569 aa20.58■□□□□ 0.89
CAPN1-222ENST00000532285 SERINC1Q9NRX5 453 aa20.58■□□□□ 0.89
CAPN1-222ENST00000532285 EMC9Q9Y3B6 208 aa20.58■□□□□ 0.89
CAPN1-222ENST00000532285 ANKRD17O75179 2603 aaKnown RBP20.58■□□□□ 0.89
CAPN1-222ENST00000532285 CSMD1Q96PZ7 3565 aa20.58■□□□□ 0.88
CAPN1-222ENST00000532285 TMEM247A6NEH6 219 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 CLIC1O00299 241 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 BCAS1O75363 584 aaPredicted RBP20.57■□□□□ 0.88
CAPN1-222ENST00000532285 CGAP01215 116 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 TFPTP0C1Z6 253 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 PABPC4LP0CB38 370 aaKnown RBP20.57■□□□□ 0.88
CAPN1-222ENST00000532285 CD8BP10966 210 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 PCYT1AP49585 367 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 CRISP3P54108 245 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 MERTKQ12866 999 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 MAPK11Q15759 364 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 LRIF1Q5T3J3 769 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 C3orf33Q6P1S2 294 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 TMEM200AQ86VY9 491 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 ZNF563Q8TA94 476 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 SLC38A5Q8WUX1 472 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 WDR60Q8WVS4 1066 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 NPHS2Q9NP85 383 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 SLC52A3Q9NQ40 469 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 DCTN4Q9UJW0 460 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 TRIM33Q9UPN9 1127 aa20.57■□□□□ 0.88
CAPN1-222ENST00000532285 CLDN24A6NM45 220 aa20.56■□□□□ 0.88
CAPN1-222ENST00000532285 SS18L1O75177 396 aaPredicted RBP20.56■□□□□ 0.88
CAPN1-222ENST00000532285 EPXP11678 715 aa20.56■□□□□ 0.88
CAPN1-222ENST00000532285 NID1P14543 1247 aa20.56■□□□□ 0.88
CAPN1-222ENST00000532285 HOXB9P17482 250 aaPredicted RBP20.56■□□□□ 0.88
CAPN1-222ENST00000532285 NCF2P19878 526 aaPredicted RBP20.56■□□□□ 0.88
CAPN1-222ENST00000532285 SLC7A1P30825 629 aa20.56■□□□□ 0.88
CAPN1-222ENST00000532285 RYKP34925 604 aa20.56■□□□□ 0.88
CAPN1-222ENST00000532285 CPOXP36551 454 aa20.56■□□□□ 0.88
CAPN1-222ENST00000532285 APOBEC1P41238 236 aaKnown RBP20.56■□□□□ 0.88
CAPN1-222ENST00000532285 CTBP2P56545 445 aa20.56■□□□□ 0.88
CAPN1-222ENST00000532285 FADDQ13158 208 aa20.56■□□□□ 0.88
CAPN1-222ENST00000532285 RGNQ15493 299 aa20.56■□□□□ 0.88
CAPN1-222ENST00000532285 ZNF239Q16600 458 aaKnown RBP20.56■□□□□ 0.88
CAPN1-222ENST00000532285 PLEKHM3Q6ZWE6 761 aa20.56■□□□□ 0.88
CAPN1-222ENST00000532285 CNOT9Q92600 299 aaKnown RBP20.56■□□□□ 0.88
CAPN1-222ENST00000532285 SLC39A3Q9BRY0 314 aa20.56■□□□□ 0.88
CAPN1-222ENST00000532285 OPN3Q9H1Y3 402 aaPredicted RBP20.56■□□□□ 0.88
CAPN1-222ENST00000532285 PROCRQ9UNN8 238 aa20.56■□□□□ 0.88
CAPN1-222ENST00000532285 POLQO75417 2590 aa20.55■□□□□ 0.88
CAPN1-222ENST00000532285 MYO9AB2RTY4 2548 aa20.55■□□□□ 0.88
CAPN1-222ENST00000532285 CTAG2O75638 210 aa20.55■□□□□ 0.88
CAPN1-222ENST00000532285 BCHEP06276 602 aa20.55■□□□□ 0.88
CAPN1-222ENST00000532285 PLAURQ03405 335 aa20.55■□□□□ 0.88
CAPN1-222ENST00000532285 DAZAP2Q15038 168 aaPredicted RBP20.55■□□□□ 0.88
CAPN1-222ENST00000532285 OR6K3Q8NGY3 331 aa20.55■□□□□ 0.88
CAPN1-222ENST00000532285 LINC01560Q8TB33 94 aa20.55■□□□□ 0.88
CAPN1-222ENST00000532285 ROBO4Q8WZ75 1007 aa20.55■□□□□ 0.88
CAPN1-222ENST00000532285 SRXN1Q9BYN0 137 aa20.55■□□□□ 0.88
CAPN1-222ENST00000532285 COQ10BQ9H8M1 238 aa20.55■□□□□ 0.88
CAPN1-222ENST00000532285 PLSCR4Q9NRQ2 329 aa20.55■□□□□ 0.88
CAPN1-222ENST00000532285 DNAJB12Q9NXW2 375 aaKnown RBP20.55■□□□□ 0.88
CAPN1-222ENST00000532285 ELOVL5Q9NYP7 299 aa20.55■□□□□ 0.88
CAPN1-222ENST00000532285 CLEC4AQ9UMR7 237 aa20.55■□□□□ 0.88
CAPN1-222ENST00000532285 DSPPQ9NZW4 1301 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 UQCRHLA0A096LP55 91 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 A0A0G2JND7 137 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 A0A0G2JPF8 293 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 FAM221AA4D161 298 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 A6NNC1 897 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 HNRNPCL2B2RXH8 293 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 HNRNPCL3B7ZW38 293 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 HNRNPCL1O60812 293 aaKnown RBP20.54■□□□□ 0.88
CAPN1-222ENST00000532285 HNRNPCL4P0DMR1 293 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 PPIBP23284 216 aaKnown RBP20.54■□□□□ 0.88
CAPN1-222ENST00000532285 CD79BP40259 229 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 RAC3P60763 192 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 RNPS1Q15287 305 aaKnown RBP20.54■□□□□ 0.88
CAPN1-222ENST00000532285 PAGE3Q5JUK9 113 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 MRPL2Q5T653 305 aaKnown RBP20.54■□□□□ 0.88
CAPN1-222ENST00000532285 ZNF474Q6S9Z5 364 aaPredicted RBP20.54■□□□□ 0.88
CAPN1-222ENST00000532285 GRINAQ7Z429 371 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 ZNF610Q8N9Z0 462 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 OR52P1PQ8NH57 321 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 RNF128Q8TEB7 428 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 SLC25A43Q8WUT9 341 aaPredicted RBP20.54■□□□□ 0.88
CAPN1-222ENST00000532285 DACH2Q96NX9 599 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 CCDC106Q9BWC9 280 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 SLC25A37Q9NYZ2 338 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 NDRG3Q9UGV2 375 aa20.54■□□□□ 0.88
CAPN1-222ENST00000532285 SPIN1Q9Y657 262 aaPredicted RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms