RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 PRG2P13727 222 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 CPN1P15169 458 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 NCK1P16333 377 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 PSMA4P25789 261 aaKnown RBP20.12■□□□□ 0.81
LRRK1-208ENST00000532029 ACAA2P42765 397 aaKnown RBP20.12■□□□□ 0.81
LRRK1-208ENST00000532029 CA7P43166 264 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 HTR3AP46098 478 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 CRYBA2P53672 197 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 SRYQ05066 204 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 BNIP1Q12981 228 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 DNAL1Q4LDG9 190 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 C1QL3Q5VWW1 255 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 GLYATQ6IB77 296 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 C6orf89Q6UWU4 347 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 PLEKHM3Q6ZWE6 761 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 GRINAQ7Z429 371 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 DOLPP1Q86YN1 238 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 UBQLNLQ8IYU4 475 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 EID3Q8N140 333 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 CADM2Q8N3J6 435 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 MEIOBQ8N635 442 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 GPR32P1Q8NGA4 272 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 LZICQ8WZA0 190 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 ZNF524Q96C55 264 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 WDYHV1Q96HA8 205 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 SERINC1Q9NRX5 453 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 PRPF19Q9UMS4 504 aaKnown RBP20.12■□□□□ 0.81
LRRK1-208ENST00000532029 SVILO95425 2214 aa20.12■□□□□ 0.81
LRRK1-208ENST00000532029 PRRC2CQ9Y520 2896 aaKnown RBP20.11■□□□□ 0.81
LRRK1-208ENST00000532029 H0Y3Z8 333 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 GYG2O15488 501 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 SEC14L5O43304 696 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 WDR1O75083 606 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 ATP5HO75947 161 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 NTN1O95631 604 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 FESP07332 822 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 GABRA1P14867 456 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 ZNF708P17019 499 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 SLC1A3P43003 542 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 RAC1P63000 192 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 HOXC5Q00444 222 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 SELENBP1Q13228 472 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 CEACAM7Q14002 265 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 SF3B4Q15427 424 aaKnown RBP eCLIP20.11■□□□□ 0.81
LRRK1-208ENST00000532029 EMC4Q5J8M3 183 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 WBP2NLQ6ICG8 309 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 POMZP3Q6PJE2 187 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 COMTD1Q86VU5 262 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 RANBP3LQ86VV4 465 aaPredicted RBP20.11■□□□□ 0.81
LRRK1-208ENST00000532029 ARHGDIGQ99819 225 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 TMEM185BQ9H7F4 350 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 RPS6KB2Q9UBS0 482 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 TESQ9UGI8 421 aaKnown RBP20.11■□□□□ 0.81
LRRK1-208ENST00000532029 MAGEL2Q9UJ55 1249 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 SLC9A8Q9Y2E8 581 aa20.11■□□□□ 0.81
LRRK1-208ENST00000532029 ZNF407Q9C0G0 2248 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 A0A1B0GUH1 482 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 AHRRA9YTQ3 701 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 M0R3H8 397 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 FREM3P0C091 2139 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 PTGER4P35408 488 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 APOBEC1P41238 236 aaKnown RBP20.1■□□□□ 0.81
LRRK1-208ENST00000532029 RASSF2P50749 326 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 DLX5P56178 289 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 CLDN18P56856 261 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 NRF1Q16656 503 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 CHMP1BQ7LBR1 199 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 ULK2Q8IYT8 1036 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 LILRA2Q8N149 483 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 ATP6V1C2Q8NEY4 427 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 OR52E4Q8NGH9 312 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 TPD52L3Q96J77 140 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 ZNF559Q9BR84 538 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 TRIM2Q9C040 744 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 SPIN1Q9Y657 262 aaPredicted RBP20.1■□□□□ 0.81
LRRK1-208ENST00000532029 PCNX3Q9H6A9 2034 aa20.1■□□□□ 0.81
LRRK1-208ENST00000532029 GJE1A6NN92 205 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 CCL21O00585 134 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 ZNF682O95780 498 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 SERPINA1P01009 418 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 HOXD4P09016 255 aaPredicted RBP20.09■□□□□ 0.81
LRRK1-208ENST00000532029 IL11P20809 199 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 ACVR2AP27037 513 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 TACR3P29371 465 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 MSX2P35548 267 aaPredicted RBP20.09■□□□□ 0.81
LRRK1-208ENST00000532029 POLR2HP52434 150 aaKnown RBP20.09■□□□□ 0.81
LRRK1-208ENST00000532029 ZNF136P52737 540 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 BNIP2Q12982 314 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 C1orf185Q5T7R7 199 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 C3orf33Q6P1S2 294 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 C3P1Q6ZMU1 363 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 VANGL1Q8TAA9 524 aaPredicted RBP20.09■□□□□ 0.81
LRRK1-208ENST00000532029 BTBD10Q9BSF8 475 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 THTPAQ9BU02 230 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 TMEM27Q9HBJ8 222 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 CTPS2Q9NRF8 586 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 RPS6KA6Q9UK32 745 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 SH3GLB1Q9Y371 365 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 SNX13Q9Y5W8 968 aa20.09■□□□□ 0.81
LRRK1-208ENST00000532029 LRRTM2O43300 516 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms