RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 CUTCQ9NTM9 273 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 OCIAD1Q9NX40 245 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 EIF3KQ9UBQ5 218 aaKnown RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 MTRF1LQ9UGC7 380 aaKnown RBP3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 PHF11Q9UIL8 331 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 LNPEPQ9UIQ6 1025 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 STAP1Q9ULZ2 295 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 GAB2Q9UQC2 676 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 PPP2R2CQ9Y2T4 447 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 TAF1P21675 1872 aa3.69□□□□□ -1.82
AC055878.1-201ENST00000531858 TRAV6A0A075B6T7 132 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 A0A1W2PRD5 423 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 A8MUA0 341 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 NIPSNAP2O75323 286 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 CBR3O75828 277 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 CDK14O94921 469 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 CELA2AP08217 269 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 FOXN2P32314 431 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 HTR2BP41595 481 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 TSFMP43897 325 aaKnown RBP3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 QARSP47897 775 aaKnown RBP3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 CX3CR1P49238 355 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 PSMC5P62195 406 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 CSNK2BP67870 215 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 SSBP2P81877 361 aaPredicted RBP3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 OC90Q02509 493 aaPredicted RBP3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 ILKQ13418 452 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 LAGE3Q14657 143 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 GNMTQ14749 295 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 FASTKD3Q14CZ7 662 aaKnown RBP3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 UNC50Q53HI1 259 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 ULK3Q6PHR2 472 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 UQCC3Q6UW78 93 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 LRRC31Q6UY01 552 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 SLC25A48Q6ZT89 311 aaKnown RBP3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 FRA10AC1Q70Z53 315 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 TRMT10CQ7L0Y3 403 aaKnown RBP3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 CHMP1BQ7LBR1 199 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 SLC16A14Q7RTX9 510 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 MRPL21Q7Z2W9 205 aaKnown RBP3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 NFE4Q86UQ8 179 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 NKAIN4Q8IVV8 208 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 MYOCDQ8IZQ8 938 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 JAGN1Q8N5M9 183 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 FNDC5Q8NAU1 212 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 OR4D9Q8NGE8 314 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 OR5AP2Q8NGF4 316 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 OR5L2Q8NGL0 311 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 MAPK15Q8TD08 544 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 DDI1Q8WTU0 396 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 CCDC12Q8WUD4 166 aaPredicted RBP3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 PCNPQ8WW12 178 aaKnown RBP3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 NAT6Q93015 286 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 BIRC7Q96CA5 298 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 PLEKHA8Q96JA3 519 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 C9orf72Q96LT7 481 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 GLT1D1Q96MS3 346 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 ZNF641Q96N77 438 aaPredicted RBP3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 XPO6Q96QU8 1125 aaKnown RBP3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 CYTH2Q99418 400 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 FMO2Q99518 471 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 PSD2Q9BQI7 771 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 ZNF670Q9BS34 389 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 RAB1BQ9H0U4 201 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 PPA2Q9H2U2 334 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 NANSQ9NR45 359 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 ZDHHC18Q9NUE0 388 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 WRAP73Q9P2S5 460 aaPredicted RBP3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 SEC14L4Q9UDX3 406 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 MYO3BQ8WXR4 1341 aa3.68□□□□□ -1.82
AC055878.1-201ENST00000531858 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 PLSCR5A0PG75 271 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 ZNF724A8MTY0 619 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 E7EWF7 191 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 C11orf98E9PRG8 122 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 SOCS2O14508 198 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 PSTPIP1O43586 416 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 TYROBPO43914 113 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 CXCL13O43927 109 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 CRTAPO75718 401 aaPredicted RBP3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 ATP5LO75964 103 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 NUDT14O95848 222 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 MMP1P03956 469 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 P04436 131 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 SNRPCP09234 159 aaKnown RBP3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 UBCP0CG48 685 aaKnown RBP3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 PSG1P11464 419 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 NEFHP12036 1026 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 RNH1P13489 461 aaKnown RBP3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 PAX1P15863 534 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 ZNF10P21506 573 aaPredicted RBP3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 UGT1A4P22310 534 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 HMGB2P26583 209 aaKnown RBP3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 CD82P27701 267 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 ETV5P41161 510 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 NAA10P41227 235 aaPredicted RBP3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 YAP1P46937 504 aaKnown RBP3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 NPBWR2P48146 333 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 TMEM50BP56557 158 aa3.67□□□□□ -1.82
AC055878.1-201ENST00000531858 RND3P61587 244 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms