RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 ALKBH2Q6NS38 261 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 ADAM5Q6NVV9 412 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 OLIG3Q7RTU3 272 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 C16orf62Q7Z3J2 963 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 MREGQ8N565 214 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 RAB3IL1Q8TBN0 382 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 HSD17B8Q92506 261 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 KISS1RQ969F8 398 aaPredicted RBP14.94□□□□□ -0.02
CPSF1-207ENST00000531727 OR5B2Q96R09 309 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 USB1Q9BQ65 265 aaKnown RBP14.94□□□□□ -0.02
CPSF1-207ENST00000531727 DPY30Q9C005 99 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 C20orf27Q9GZN8 174 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 QRSL1Q9H0R6 528 aaKnown RBP14.94□□□□□ -0.02
CPSF1-207ENST00000531727 OR51I1Q9H343 314 aa14.94□□□□□ -0.02
CPSF1-207ENST00000531727 SSU72Q9NP77 194 aaKnown RBP14.94□□□□□ -0.02
CPSF1-207ENST00000531727 PRSS51A0A1B0GVH4 220 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 ZNF814B7Z6K7 855 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 SMAD9O15198 467 aaKnown RBP14.93□□□□□ -0.02
CPSF1-207ENST00000531727 TM9SF1O15321 606 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 RGS16O15492 202 aaPredicted RBP14.93□□□□□ -0.02
CPSF1-207ENST00000531727 KIAA0513O60268 411 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 CYTIPO60759 359 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 GUSBP08236 651 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 UBTFL6P0CB48 400 aaPredicted RBP14.93□□□□□ -0.02
CPSF1-207ENST00000531727 PGCP20142 388 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 UQCRC2P22695 453 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 OR3A2P47893 321 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 CASP9P55211 416 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 SESN3P58005 492 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 RASGEF1BQ0VAM2 473 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 ITGADQ13349 1161 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 TAB1Q15750 504 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 MAPK14Q16539 360 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 NCMAPQ5T1S8 102 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 Q6ZT83 130 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 EIF3MQ7L2H7 374 aaKnown RBP14.93□□□□□ -0.02
CPSF1-207ENST00000531727 ANKRD46Q86W74 232 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 VPS37AQ8NEZ2 397 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 OIT3Q8WWZ8 545 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 TMEM234Q8WY98 164 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 TESCQ96BS2 214 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 SORT1Q99523 831 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 POTEKPQ9BYX7 375 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 ESRP2Q9H6T0 727 aaKnown RBP14.93□□□□□ -0.02
CPSF1-207ENST00000531727 NGBQ9NPG2 151 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 POLE3Q9NRF9 147 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 SERINC1Q9NRX5 453 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 RNF115Q9Y4L5 304 aa14.93□□□□□ -0.02
CPSF1-207ENST00000531727 CNOT4O95628 575 aaKnown RBP14.92□□□□□ -0.02
CPSF1-207ENST00000531727 CPSF4O95639 269 aaKnown RBP14.92□□□□□ -0.02
CPSF1-207ENST00000531727 DHRS4L1P0CG22 281 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 OR12D1P0DN82 309 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 PGM1P36871 562 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 SLC1A6P48664 564 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 RPL14P50914 215 aaKnown RBP14.92□□□□□ -0.02
CPSF1-207ENST00000531727 RPS4XP62701 263 aaKnown RBP14.92□□□□□ -0.02
CPSF1-207ENST00000531727 PHC1P78364 1004 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 MERTKQ12866 999 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 ATAD3BQ5T9A4 648 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 ANXA8L1Q5VT79 327 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 AP1ARQ63HQ0 302 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 SAXO2Q658L1 398 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 TNFAIP8L2Q6P589 184 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-207ENST00000531727 BHLHA15Q7RTS1 189 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-207ENST00000531727 KIRREL3Q8IZU9 778 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 ZNF619Q8N2I2 560 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 LILRB1Q8NHL6 650 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-207ENST00000531727 XAGE5Q8WWM1 108 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 ZNF300Q96RE9 604 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-207ENST00000531727 ACER3Q9NUN7 267 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 PRSS50Q9UI38 385 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 HAO1Q9UJM8 370 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 SLC35A3Q9Y2D2 325 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 WDR45Q9Y484 360 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 ARID1AO14497 2285 aa14.92□□□□□ -0.02
CPSF1-207ENST00000531727 NSD1Q96L73 2696 aaPredicted RBP14.92□□□□□ -0.02
CPSF1-207ENST00000531727 ZNF724A8MTY0 619 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 ANKRD28O15084 1053 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 CLOCKO15516 846 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 CD3EP07766 207 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 DIO1P49895 249 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 ATP5J2P56134 94 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 CSNK2A1P68400 391 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-207ENST00000531727 FUT5Q11128 374 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 CAPRIN1Q14444 709 aaKnown RBP14.91□□□□□ -0.02
CPSF1-207ENST00000531727 CASP8Q14790 479 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 DPY19L1Q2PZI1 675 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 SYT14P1Q58G82 188 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 TYW3Q6IPR3 259 aaKnown RBP14.91□□□□□ -0.02
CPSF1-207ENST00000531727 SEZ6L2Q6UXD5 910 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 TMPPEQ6ZT21 453 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 LRRC34Q8IZ02 419 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 FAM71CQ8NEG0 241 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 SLC25A43Q8WUT9 341 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-207ENST00000531727 ZNF75CPQ92670 426 aaPredicted RBP14.91□□□□□ -0.02
CPSF1-207ENST00000531727 RAB8BQ92930 207 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 FBXW5Q969U6 566 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 ROPN1LQ96C74 230 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 NEURL3Q96EH8 262 aa14.91□□□□□ -0.02
CPSF1-207ENST00000531727 SAP130Q9H0E3 1048 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms