RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 RAP2CQ9Y3L5 183 aa14.02□□□□□ -0.17
CPSF1-205ENST00000531042 ZNF814B7Z6K7 855 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 CYP7B1O75881 506 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 H6PDO95479 791 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 CSTAP01040 98 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 MYZAPP0CAP1 466 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 IL32P24001 234 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 CASP9P55211 416 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 SESN3P58005 492 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 PHC1P78364 1004 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 P2RY6Q15077 328 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 TAB1Q15750 504 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 KRT71Q3SY84 523 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 NCMAPQ5T1S8 102 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 ADAM5Q6NVV9 412 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 C3orf33Q6P1S2 294 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 C16orf62Q7Z3J2 963 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 MREGQ8N565 214 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 LILRB1Q8NHL6 650 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-205ENST00000531042 HSD17B8Q92506 261 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 AKAP1Q92667 903 aaKnown RBP eCLIP14.01□□□□□ -0.17
CPSF1-205ENST00000531042 KISS1RQ969F8 398 aaPredicted RBP14.01□□□□□ -0.17
CPSF1-205ENST00000531042 OR5B2Q96R09 309 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 DPY30Q9C005 99 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 QRSL1Q9H0R6 528 aaKnown RBP14.01□□□□□ -0.17
CPSF1-205ENST00000531042 EXD2Q9NVH0 621 aa14.01□□□□□ -0.17
CPSF1-205ENST00000531042 PRSS51A0A1B0GVH4 220 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 SMAD9O15198 467 aaKnown RBP14□□□□□ -0.17
CPSF1-205ENST00000531042 RGS16O15492 202 aaPredicted RBP14□□□□□ -0.17
CPSF1-205ENST00000531042 CYTIPO60759 359 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 CNOT4O95628 575 aaKnown RBP14□□□□□ -0.17
CPSF1-205ENST00000531042 CPSF4O95639 269 aaKnown RBP14□□□□□ -0.17
CPSF1-205ENST00000531042 AGR2O95994 175 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 GUSBP08236 651 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 UBTFL6P0CB48 400 aaPredicted RBP14□□□□□ -0.17
CPSF1-205ENST00000531042 OR12D1P0DN82 309 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 PGCP20142 388 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 UQCRC2P22695 453 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 OR3A2P47893 321 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 RPL14P50914 215 aaKnown RBP14□□□□□ -0.17
CPSF1-205ENST00000531042 RASGEF1BQ0VAM2 473 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 ITGADQ13349 1161 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 MAPK14Q16539 360 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 ANXA8L1Q5VT79 327 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 AP1ARQ63HQ0 302 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 Q6ZT83 130 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 EIF3MQ7L2H7 374 aaKnown RBP14□□□□□ -0.17
CPSF1-205ENST00000531042 ANKRD46Q86W74 232 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 XAGE5Q8WWM1 108 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 TESCQ96BS2 214 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 SORT1Q99523 831 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 USB1Q9BQ65 265 aaKnown RBP14□□□□□ -0.17
CPSF1-205ENST00000531042 SSU72Q9NP77 194 aaKnown RBP14□□□□□ -0.17
CPSF1-205ENST00000531042 NGBQ9NPG2 151 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 SERINC1Q9NRX5 453 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 ABCA2Q9BZC7 2435 aa14□□□□□ -0.17
CPSF1-205ENST00000531042 FN1P02751 2386 aaKnown RBP14□□□□□ -0.17
CPSF1-205ENST00000531042 C9JVG2 144 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 ANKRD28O15084 1053 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 TM9SF1O15321 606 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 KIAA0513O60268 411 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 SNUPNO95149 360 aaKnown RBP13.99□□□□□ -0.17
CPSF1-205ENST00000531042 CD3EP07766 207 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 DHRS4L1P0CG22 281 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 PGM1P36871 562 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 SLC1A6P48664 564 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 DIO1P49895 249 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 MERTKQ12866 999 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 SAXO2Q658L1 398 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 TYW3Q6IPR3 259 aaKnown RBP13.99□□□□□ -0.17
CPSF1-205ENST00000531042 TNFAIP8L2Q6P589 184 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-205ENST00000531042 SEZ6L2Q6UXD5 910 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 TMPPEQ6ZT21 453 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 ZNF619Q8N2I2 560 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 FAM71CQ8NEG0 241 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 VPS37AQ8NEZ2 397 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 OIT3Q8WWZ8 545 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 TMEM234Q8WY98 164 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 ZNF75CPQ92670 426 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-205ENST00000531042 RAB8BQ92930 207 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 ZNF775Q96BV0 537 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-205ENST00000531042 ZNF300Q96RE9 604 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-205ENST00000531042 POTEKPQ9BYX7 375 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 SAP130Q9H0E3 1048 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 ESRP2Q9H6T0 727 aaKnown RBP13.99□□□□□ -0.17
CPSF1-205ENST00000531042 POLE3Q9NRF9 147 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 ACER3Q9NUN7 267 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.99□□□□□ -0.173e-6■■■■□ 21.7
CPSF1-205ENST00000531042 PRSS50Q9UI38 385 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 HAO1Q9UJM8 370 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 LAMP3Q9UQV4 416 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 WDR45Q9Y484 360 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 RNF115Q9Y4L5 304 aa13.99□□□□□ -0.17
CPSF1-205ENST00000531042 V9GYY5 206 aaPredicted RBP13.99□□□□□ -0.17
CPSF1-205ENST00000531042 USF3Q68DE3 2245 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 ZNF724A8MTY0 619 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 CLOCKO15516 846 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 BGNP21810 368 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 EDNRAP25101 427 aa13.98□□□□□ -0.17
CPSF1-205ENST00000531042 ATP5J2P56134 94 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms