RNA–Protein interactions for RNA: ENST00000530405.5

PACSIN3-206, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-206ENST00000530405 MALT1Q9UDY8 824 aa14.3□□□□□ -0.12
PACSIN3-206ENST00000530405 TRAF6Q9Y4K3 522 aa14.3□□□□□ -0.12
PACSIN3-206ENST00000530405 PKD1L1Q8TDX9 2849 aa14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 H6PDO95479 791 aa14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 SNRPD2P62316 118 aaKnown RBP14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 CARTPTQ16568 116 aa14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 IMPG1Q17R60 797 aa14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 ABLIM2Q6H8Q1 611 aa14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 LRIG3Q6UXM1 1119 aa14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 TRIM46Q7Z4K8 759 aa14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 WDR31Q8NA23 367 aa14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 CIDECQ96AQ7 238 aaPredicted RBP14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 FBXO17Q96EF6 278 aa14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 C16orf58Q96GQ5 468 aa14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 EGLN2Q96KS0 407 aa14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 STACQ99469 402 aa14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 FUT8Q9BYC5 575 aa14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 DUSP22Q9NRW4 184 aa14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 NOSIPQ9Y314 301 aaKnown RBP14.29□□□□□ -0.12
PACSIN3-206ENST00000530405 TGP01266 2768 aa14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 ATP6V1G2-DDX39BF2Z307 99 aa14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 GTPBP1O00178 669 aaKnown RBP14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 ATP6V1C1P21283 382 aa14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 FRKP42685 505 aaPredicted RBP14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 DIO1P49895 249 aa14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 CSNK2A1P68400 391 aaPredicted RBP14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 QPRTQ15274 297 aa14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 ZSWIM7Q19AV6 140 aa14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 TMPPEQ6ZT21 453 aa14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 MTDHQ86UE4 582 aaKnown RBP14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 C17orf78Q8N4C9 275 aa14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 SEMA6DQ8NFY4 1073 aa14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 OR5W2Q8NH69 310 aa14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 HPS1Q92902 700 aa14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 L3HYPDHQ96EM0 354 aa14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 OTUB1Q96FW1 271 aaPredicted RBP14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 METTL2AQ96IZ6 378 aaKnown RBP14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 PAFAH2Q99487 392 aa14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 ACSS1Q9NUB1 689 aaPredicted RBP14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 GIN1Q9NXP7 522 aa14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 METRNQ9UJH8 293 aa14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 AMDHD2Q9Y303 409 aa14.28□□□□□ -0.12
PACSIN3-206ENST00000530405 ZNF716A6NP11 495 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 NPIPB8E9PQR5 432 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 PDLIM1O00151 329 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 GPR171O14626 319 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 TBX19O60806 448 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 RSL1D1O76021 490 aaKnown RBP14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 VENTXO95231 258 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 ITGA5P08648 1049 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 ATP5F1P24539 256 aaPredicted RBP14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 PRKAA2P54646 552 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 FOXG1P55316 489 aaPredicted RBP14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 FOXA1P55317 472 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 C2orf54Q08AI8 447 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 MLC1Q15049 377 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 NDUFAF6Q330K2 333 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 TIGD2Q4W5G0 525 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 ANKRD26P1Q6NSI1 321 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 C3orf56Q8N813 242 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 LINC01356Q8N9X3 169 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 C1orf162Q8NEQ5 155 aaPredicted RBP14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 TOR1AIP2Q8NFQ8 470 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 JADE3Q92613 823 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 CDS1Q92903 461 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 VRK1Q99986 396 aaPredicted RBP14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 PIGUQ9H490 435 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 ANKZF1Q9H8Y5 726 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 NINJ2Q9NZG7 142 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 ZNF180Q9UJW8 692 aa14.27□□□□□ -0.13
PACSIN3-206ENST00000530405 LRP5LA4QPB2 252 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 ESPNB1AK53 854 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 TRIM49D1C9J1S8 452 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 NPIPB9F8W1W9 429 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 SULT2B1O00204 365 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 EIF4E2O60573 245 aaKnown RBP14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 MRPL33O75394 65 aaKnown RBP14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 TACSTD2P09758 323 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 GIFP27352 417 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 NTF4P34130 210 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 RNF144AP50876 292 aaPredicted RBP14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 CHN2P52757 468 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 ATP12AP54707 1039 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 CBFBQ13951 182 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 KIAA0040Q15053 153 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 ZNF385BQ569K4 471 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 DEF8Q6ZN54 512 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 SLC46A3Q7Z3Q1 461 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 SLC22A9Q8IVM8 553 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 ANKS4BQ8N8V4 417 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 PPCDCQ96CD2 204 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 OCEL1Q9H607 264 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 MID1IP1Q9NPA3 183 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 RRAGDQ9NQL2 400 aaPredicted RBP14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 SLC17A5Q9NRA2 495 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 SERINC1Q9NRX5 453 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 TMEM216Q9P0N5 145 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 DCTN4Q9UJW0 460 aa14.26□□□□□ -0.13
PACSIN3-206ENST00000530405 MOKQ9UQ07 419 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms