RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 RFWD2Q8NHY2 731 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 LRRC8CQ8TDW0 803 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 SLC25A43Q8WUT9 341 aaPredicted RBP8.6□□□□□ -1.03
CHD7-208ENST00000528280 MBD6Q96DN6 1003 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 ITCHQ96J02 903 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 MED18Q9BUE0 208 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 THUMPD3Q9BV44 507 aaKnown RBP8.6□□□□□ -1.03
CHD7-208ENST00000528280 ARMC7Q9H6L4 198 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 EXOSC3Q9NQT5 275 aaKnown RBP8.6□□□□□ -1.03
CHD7-208ENST00000528280 SDR39U1Q9NRG7 319 aaPredicted RBP8.6□□□□□ -1.03
CHD7-208ENST00000528280 ACER3Q9NUN7 267 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 TMEM45AQ9NWC5 275 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 ZNF232Q9UNY5 417 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 MED12Q93074 2177 aa8.6□□□□□ -1.03
CHD7-208ENST00000528280 ZNF469Q96JG9 3925 aaPredicted RBP8.6□□□□□ -1.03
CHD7-208ENST00000528280 MPDZO75970 2070 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 NPIPA5A0A0B4J1W7 369 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 NPIPA7E9PJI5 369 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 KIAA0513O60268 411 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 NTN1O95631 604 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 YES1P07947 543 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 NPIPA8P0DM63 369 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 NR2F1P10589 423 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 SFTPDP35247 375 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 CCR4P51679 360 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 POLR2JP52435 117 aaKnown RBP8.59□□□□□ -1.03
CHD7-208ENST00000528280 ART1P52961 327 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 IST1P53990 364 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 NME5P56597 212 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 STX1BP61266 288 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 CSNK2A1P68400 391 aaPredicted RBP8.59□□□□□ -1.03
CHD7-208ENST00000528280 FOXF1Q12946 379 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 SKP2Q13309 424 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 KEAP1Q14145 624 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 TYW3Q6IPR3 259 aaKnown RBP8.59□□□□□ -1.03
CHD7-208ENST00000528280 C3orf33Q6P1S2 294 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 TNFAIP8L2Q6P589 184 aaPredicted RBP8.59□□□□□ -1.03
CHD7-208ENST00000528280 ZNF474Q6S9Z5 364 aaPredicted RBP8.59□□□□□ -1.03
CHD7-208ENST00000528280 EPGNQ6UW88 154 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 SSX8Q7RTT4 187 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 RNF130Q86XS8 419 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 PEX5LQ8IYB4 626 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 ZNF440Q8IYI8 595 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 CLEC4FQ8N1N0 589 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 ARFGAP2Q8N6H7 521 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 ZNF563Q8TA94 476 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 ZFP90Q8TF47 636 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 DYDC1Q8WWB3 177 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 RAB8BQ92930 207 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 ATP6V1G3Q96LB4 118 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 TEX37Q96LM6 180 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 C7orf26Q96N11 449 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 WFIKKN1Q96NZ8 548 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 TMUB1Q9BVT8 246 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 OPN3Q9H1Y3 402 aaPredicted RBP8.59□□□□□ -1.03
CHD7-208ENST00000528280 RAD21L1Q9H4I0 556 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 SERHL2Q9H4I8 314 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 CACYBPQ9HB71 228 aaKnown RBP8.59□□□□□ -1.03
CHD7-208ENST00000528280 KLHL9Q9P2J3 617 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 ADAM21Q9UKJ8 722 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 GPR52Q9Y2T5 361 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 TESMINQ9Y4I5 508 aa8.59□□□□□ -1.03
CHD7-208ENST00000528280 FAM234BA2RU67 622 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 HMGB1P1B2RPK0 211 aaPredicted RBP8.58□□□□□ -1.04
CHD7-208ENST00000528280 HMGN4O00479 90 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 EFNA2O43921 213 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 H6PDO95479 791 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 OPN1LWP04000 364 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 RAF1P04049 648 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 HRGP04196 525 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 DBIP07108 87 aaKnown RBP8.58□□□□□ -1.04
CHD7-208ENST00000528280 UBTFL6P0CB48 400 aaPredicted RBP8.58□□□□□ -1.04
CHD7-208ENST00000528280 IL7RP16871 459 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 ENPP1P22413 925 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 CRYGSP22914 178 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 IL12AP29459 219 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 PGM1P36871 562 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 MRPL19P49406 292 aaKnown RBP8.58□□□□□ -1.04
CHD7-208ENST00000528280 SESN3P58005 492 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 CHRNEQ04844 493 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 MERTKQ12866 999 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 P2RY6Q15077 328 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 ZNF239Q16600 458 aaKnown RBP8.58□□□□□ -1.04
CHD7-208ENST00000528280 TIGD2Q4W5G0 525 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 FCRLAQ7L513 359 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 GRINAQ7Z429 371 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 ATP6V1C2Q8NEY4 427 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 STEAP2Q8NFT2 490 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 RNF128Q8TEB7 428 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 ZBTB9Q96C00 473 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 ZHX1-C8orf76Q96EF9 292 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 ALPK1Q96QP1 1244 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 CCDC28BQ9BUN5 200 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 KLHL4Q9C0H6 718 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 CXXC4Q9H2H0 198 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 RABEP2Q9H5N1 569 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 TMEM185BQ9H7F4 350 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 NGBQ9NPG2 151 aa8.58□□□□□ -1.04
CHD7-208ENST00000528280 CCM2LQ9NUG4 571 aaPredicted RBP8.58□□□□□ -1.04
CHD7-208ENST00000528280 P2RX2Q9UBL9 471 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms