RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 MAN2B1O00754 1011 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 BHLHE40O14503 412 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 SDC3O75056 442 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 KDM4BO94953 1096 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 HIST1H2ABP04908 130 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 ADRB1P08588 477 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 FUT1P19526 365 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 TEAD1P28347 426 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 CAPZA2P47755 286 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 ERVFC1P60507 584 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 ERVK-21P61565 698 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 GPNMBQ14956 572 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 ZNF626Q68DY1 528 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 NHLRC1Q6VVB1 395 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 HIST3H2AQ7L7L0 130 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 FCAMRQ8WWV6 532 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 ST8SIA2Q92186 375 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 SMPDL3BQ92485 455 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 HIST1H2ACQ93077 130 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 ARMC5Q96C12 935 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 TRMT61BQ9BVS5 477 aaKnown RBP13.6□□□□□ -0.23
CAPN1-214ENST00000528165 ZCCHC4Q9H5U6 513 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 NTMQ9P121 344 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 GPR160Q9UJ42 338 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 PRELID3BQ9Y3B1 194 aa13.6□□□□□ -0.23
CAPN1-214ENST00000528165 D6RAR5 112 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 NEDD8-MDP1E9PL57 170 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 C8orf89P0DMQ9 161 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 NT5EP21589 574 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 PSMB5P28074 263 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 CST5P28325 142 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-214ENST00000528165 REEP5Q00765 189 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 GSG1LQ6UXU4 331 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 DGLUCYQ7Z3D6 616 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 LRRTM4Q86VH4 590 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 OR1S1Q8NH92 325 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 MOAP1Q96BY2 351 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 WDR89Q96FK6 387 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-214ENST00000528165 HS6ST2Q96MM7 605 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 CMTM3Q96MX0 182 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 NPAS1Q99742 590 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 SAV1Q9H4B6 383 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-214ENST00000528165 POLMQ9NP87 494 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-214ENST00000528165 WASH6PQ9NQA3 447 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 SIDT1Q9NXL6 827 aaKnown RBP13.59□□□□□ -0.23
CAPN1-214ENST00000528165 KLK11Q9UBX7 282 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 KLF15Q9UIH9 416 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 CASP8AP2Q9UKL3 1982 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 FXYD6-FXYD2A0A087WZ82 144 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 LEFTY2O00292 366 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 ZNF749O43361 778 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 ZNF805Q5CZA5 627 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 ATRAIDQ6UW56 229 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 LSRQ86X29 649 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-214ENST00000528165 DCUN1D3Q8IWE4 304 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 NRSN1Q8IZ57 195 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 LNX2Q8N448 690 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 EIF4E3Q8N5X7 224 aaKnown RBP13.59□□□□□ -0.23
CAPN1-214ENST00000528165 THEM6Q8WUY1 208 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 DERL3Q96Q80 235 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 TTTY10Q9BZA0 68 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 ENKD1Q9H0I2 346 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 FXYD6Q9H0Q3 95 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 ADGRL4Q9HBW9 690 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 CMC2Q9NRP2 79 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 HPF1Q9NWY4 346 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 SAGE1Q9NXZ1 904 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 FBXL3Q9UKT7 428 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 MYOFQ9NZM1 2061 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 TSPAN11A1L157 253 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 HMSDA8MTL9 139 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 SNRPGP15A8MWD9 76 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 CTSLP07711 333 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 GDI2P50395 445 aaKnown RBP13.59□□□□□ -0.23
CAPN1-214ENST00000528165 B2MP61769 119 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 SLC7A9P82251 487 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 FLI1Q01543 452 aaPredicted RBP13.59□□□□□ -0.23
CAPN1-214ENST00000528165 GRM7Q14831 915 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 LINC00303Q3SY05 128 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 GAREM2Q75VX8 874 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 OVCH1Q7RTY7 1134 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 TMEM25Q86YD3 366 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 ZNF547Q8IVP9 402 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 VN1R2Q8NFZ6 395 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 PAWRQ96IZ0 340 aaKnown RBP13.59□□□□□ -0.23
CAPN1-214ENST00000528165 SLC38A3Q99624 504 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 CACYBPQ9HB71 228 aaKnown RBP13.59□□□□□ -0.23
CAPN1-214ENST00000528165 ST6GALNAC2Q9UJ37 374 aa13.59□□□□□ -0.23
CAPN1-214ENST00000528165 K7ESM1 405 aa13.58□□□□□ -0.24
CAPN1-214ENST00000528165 EMC8O43402 210 aa13.58□□□□□ -0.24
CAPN1-214ENST00000528165 FCMRO60667 390 aa13.58□□□□□ -0.24
CAPN1-214ENST00000528165 FXYD6P3P58550 94 aa13.58□□□□□ -0.24
CAPN1-214ENST00000528165 ACTC1P68032 377 aa13.58□□□□□ -0.24
CAPN1-214ENST00000528165 ACTA1P68133 377 aa13.58□□□□□ -0.24
CAPN1-214ENST00000528165 FOXK2Q01167 660 aa13.58□□□□□ -0.24
CAPN1-214ENST00000528165 EIF2B5Q13144 721 aaKnown RBP13.58□□□□□ -0.24
CAPN1-214ENST00000528165 SLC9A5Q14940 896 aa13.58□□□□□ -0.24
CAPN1-214ENST00000528165 FCRLBQ6BAA4 426 aa13.58□□□□□ -0.24
CAPN1-214ENST00000528165 FAAP20Q6NZ36 180 aa13.58□□□□□ -0.24
CAPN1-214ENST00000528165 EID2Q8N6I1 236 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms