RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 PLGP00747 810 aaPredicted RBP23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 CGAP01215 116 aa23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 PABPC4LP0CB38 370 aaKnown RBP23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 EPXP11678 715 aa23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 DSTNP60981 165 aa23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 SQLEQ14534 574 aa23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 ARFGAP2Q8N6H7 521 aa23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 ATP6V1C2Q8NEY4 427 aa23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 CPNE4Q96A23 557 aaPredicted RBP23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 SPDL1Q96EA4 605 aa23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 AURKBQ96GD4 344 aaPredicted RBP23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 SIKE1Q9BRV8 207 aa23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 RAD21L1Q9H4I0 556 aa23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 SERINC1Q9NRX5 453 aa23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 ZNF446Q9NWS9 450 aa23.6■■□□□ 1.37
TSPAN4-217ENST00000527644 CLDN24A6NM45 220 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 SS18L1O75177 396 aaPredicted RBP23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 CTAG2O75638 210 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 DBIP07108 87 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 TFPTP0C1Z6 253 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 IL7RP16871 459 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 RPS4Y1P22090 263 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 CPOXP36551 454 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 CTBP2P56545 445 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 MERTKQ12866 999 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 DAZAP2Q15038 168 aaPredicted RBP23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 MAPK11Q15759 364 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 C3orf33Q6P1S2 294 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 PEX5LQ8IYB4 626 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 ZNF563Q8TA94 476 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 LINC01560Q8TB33 94 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 WDR60Q8WVS4 1066 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 REXO5Q96IC2 774 aaKnown RBP23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 OPN3Q9H1Y3 402 aaPredicted RBP23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 RABEP2Q9H5N1 569 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 ELOVL5Q9NYP7 299 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 PROCRQ9UNN8 238 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 CSMD2Q7Z408 3487 aa23.59■■□□□ 1.37
TSPAN4-217ENST00000527644 MPDZO75970 2070 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 FAM221AA4D161 298 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 CLIC1O00299 241 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 NR5A2O00482 541 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 SLC7A1P30825 629 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 RYKP34925 604 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 CRISP3P54108 245 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 PLAURQ03405 335 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 RGNQ15493 299 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 ZNF239Q16600 458 aaKnown RBP23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 AGKQ53H12 422 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 LRIF1Q5T3J3 769 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 ZNF474Q6S9Z5 364 aaPredicted RBP23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 PLEKHM3Q6ZWE6 761 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 OR6K3Q8NGY3 331 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 SLC38A5Q8WUX1 472 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 CNOT9Q92600 299 aaKnown RBP23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 THOC1Q96FV9 657 aaKnown RBP23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 SLC39A3Q9BRY0 314 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 COQ10BQ9H8M1 238 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 SLC52A3Q9NQ40 469 aa23.58■■□□□ 1.37
TSPAN4-217ENST00000527644 TMEM247A6NEH6 219 aa23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 A6NNC1 897 aa23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 ENO4A6NNW6 628 aa23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 NID1P14543 1247 aa23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 HOXB9P17482 250 aaPredicted RBP23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 CD79BP40259 229 aa23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 APOBEC1P41238 236 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 FADDQ13158 208 aa23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 ROBO4Q8WZ75 1007 aa23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 DACH2Q96NX9 599 aa23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 SRXN1Q9BYN0 137 aa23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 NPHS2Q9NP85 383 aa23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 PLSCR4Q9NRQ2 329 aa23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 DNAJB12Q9NXW2 375 aaKnown RBP23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 DCTN4Q9UJW0 460 aa23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 CLEC4AQ9UMR7 237 aa23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 TRIM33Q9UPN9 1127 aa23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 DSPPQ9NZW4 1301 aa23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 SPG11Q96JI7 2443 aa23.57■■□□□ 1.36
TSPAN4-217ENST00000527644 UQCRHLA0A096LP55 91 aa23.56■■□□□ 1.36
TSPAN4-217ENST00000527644 BCHEP06276 602 aa23.56■■□□□ 1.36
TSPAN4-217ENST00000527644 NCF2P19878 526 aaPredicted RBP23.56■■□□□ 1.36
TSPAN4-217ENST00000527644 RAC3P60763 192 aa23.56■■□□□ 1.36
TSPAN4-217ENST00000527644 FAM27E3Q08E93 113 aa23.56■■□□□ 1.36
TSPAN4-217ENST00000527644 RNPS1Q15287 305 aaKnown RBP23.56■■□□□ 1.36
TSPAN4-217ENST00000527644 GRINAQ7Z429 371 aa23.56■■□□□ 1.36
TSPAN4-217ENST00000527644 ZNF610Q8N9Z0 462 aa23.56■■□□□ 1.36
TSPAN4-217ENST00000527644 RNF128Q8TEB7 428 aa23.56■■□□□ 1.36
TSPAN4-217ENST00000527644 SLC25A43Q8WUT9 341 aaPredicted RBP23.56■■□□□ 1.36
TSPAN4-217ENST00000527644 CCDC106Q9BWC9 280 aa23.56■■□□□ 1.36
TSPAN4-217ENST00000527644 RASSF1Q9NS23 344 aa23.56■■□□□ 1.36
TSPAN4-217ENST00000527644 NDRG3Q9UGV2 375 aa23.56■■□□□ 1.36
TSPAN4-217ENST00000527644 ANKRD17O75179 2603 aaKnown RBP23.56■■□□□ 1.36
TSPAN4-217ENST00000527644 A0A0G2JPF8 293 aa23.55■■□□□ 1.36
TSPAN4-217ENST00000527644 HNRNPCL2B2RXH8 293 aa23.55■■□□□ 1.36
TSPAN4-217ENST00000527644 HNRNPCL3B7ZW38 293 aa23.55■■□□□ 1.36
TSPAN4-217ENST00000527644 HNRNPCL1O60812 293 aaKnown RBP23.55■■□□□ 1.36
TSPAN4-217ENST00000527644 HNRNPCL4P0DMR1 293 aa23.55■■□□□ 1.36
TSPAN4-217ENST00000527644 BMP2P12643 396 aa23.55■■□□□ 1.36
TSPAN4-217ENST00000527644 FKBP2P26885 142 aaKnown RBP23.55■■□□□ 1.36
TSPAN4-217ENST00000527644 PAGE3Q5JUK9 113 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms