RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 CBARPQ8N350 705 aaPredicted RBP5.41□□□□□ -1.54
CD44-225ENST00000527326 C10orf53Q8N6V4 93 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 PNLDC1Q8NA58 520 aaKnown RBP5.41□□□□□ -1.54
CD44-225ENST00000527326 NETO2Q8NC67 525 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 FAM98AQ8NCA5 519 aaKnown RBP5.41□□□□□ -1.54
CD44-225ENST00000527326 CCNYQ8ND76 341 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 AGBL5Q8NDL9 886 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 SDR9C7Q8NEX9 313 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 MDGA1Q8NFP4 955 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 OR6J1Q8NGC5 347 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 OR5M1Q8NGP8 315 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 OR1S2Q8NGQ3 325 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 IL31RAQ8NI17 732 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 UBA3Q8TBC4 463 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 NETO1Q8TDF5 533 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 FAM216AQ8WUB2 273 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 PIH1D2Q8WWB5 315 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 RXFP2Q8WXD0 754 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 MRPS31Q92665 395 aaKnown RBP5.41□□□□□ -1.54
CD44-225ENST00000527326 VOPP1Q96AW1 172 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 ECHDC3Q96DC8 303 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 PHF21BQ96EK2 531 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 C1GALT1C1Q96EU7 318 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 LINGO1Q96FE5 620 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 FAM71F1Q96KD3 344 aaPredicted RBP5.41□□□□□ -1.54
CD44-225ENST00000527326 FAM210BQ96KR6 192 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 TEX37Q96LM6 180 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 OR14A2Q96R54 314 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 EGFL8Q99944 293 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 FDXACB1Q9BRP7 624 aaPredicted RBP5.41□□□□□ -1.54
CD44-225ENST00000527326 UTP23Q9BRU9 249 aaKnown RBP5.41□□□□□ -1.54
CD44-225ENST00000527326 ADAT1Q9BUB4 502 aaKnown RBP5.41□□□□□ -1.54
CD44-225ENST00000527326 MRI1Q9BV20 369 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 HAPLN2Q9GZV7 340 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 TLNRD1Q9H1K6 362 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 LRRN3Q9H3W5 708 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 TUBB1Q9H4B7 451 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 ASB8Q9H765 288 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 NMRK2Q9NPI5 230 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 TLR8Q9NR97 1041 aaKnown RBP5.41□□□□□ -1.54
CD44-225ENST00000527326 RNF146Q9NTX7 359 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 UQCC1Q9NVA1 299 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 ASF1BQ9NVP2 202 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 TAS2R5Q9NYW4 299 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 RCC2Q9P258 522 aaKnown RBP5.41□□□□□ -1.54
CD44-225ENST00000527326 GIMAP2Q9UG22 337 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 STARD10Q9Y365 291 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 TMED3Q9Y3Q3 217 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 NEUROG3Q9Y4Z2 214 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 KPTNQ9Y664 436 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 POMT1Q9Y6A1 747 aa5.41□□□□□ -1.54
CD44-225ENST00000527326 TRBV5-3A0A0A0MS03 114 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 TCRBV21S2A2A0A5A6 115 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 TMEM129A0AVI4 362 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 ARRDC5A6NEK1 342 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 C2CD4BA6NLJ0 364 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 DUXAA6NLW8 204 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 ZNF587BE7ETH6 402 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 AGRPO00253 132 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 MEIS2O14770 477 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 OGG1O15527 345 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 GMFGO60234 142 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 TLR5O60602 858 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 MAFKO60675 156 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 CYTIPO60759 359 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 FKTNO75072 461 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 ENTPD6O75354 484 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 ZNF821O75541 412 aaPredicted RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 GRAP2O75791 330 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 OR2F2O95006 317 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 UBL3O95164 117 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 PRAMEF12O95522 483 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 CNOT4O95628 575 aaKnown RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 NFATC1O95644 943 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 RAB36O95755 333 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 ZNF682O95780 498 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 MLYCDO95822 493 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 SOD1P00441 154 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 IGF2P01344 180 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 PPBPP02775 128 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 HLA-DPB1P04440 258 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 RPLP2P05387 115 aaKnown RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 SRPRAP08240 638 aaKnown RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 NR2F6P10588 404 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 PSMB1P20618 241 aaKnown RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 LPOP22079 712 aaPredicted RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 IDSP22304 550 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 CPT2P23786 658 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 MPZP25189 248 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 NFYBP25208 207 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 HTR2CP28335 458 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 OR1E1P30953 314 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 THBS2P35442 1172 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 RPL3P39023 403 aaKnown RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 RAD52P43351 418 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 GZMMP51124 257 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 JAK3P52333 1124 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 ZNF140P52738 457 aaPredicted RBP5.4□□□□□ -1.54
CD44-225ENST00000527326 WNT3P56703 355 aa5.4□□□□□ -1.54
CD44-225ENST00000527326 WNT4P56705 351 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms