RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 GMPPAQ96IJ6 420 aaPredicted RBP15.21■□□□□ 0.03
CCS-203ENST00000526058 MAGEB18Q96M61 343 aa15.21■□□□□ 0.03
CCS-203ENST00000526058 CCDC28BQ9BUN5 200 aa15.21■□□□□ 0.03
CCS-203ENST00000526058 POLDIP3Q9BY77 421 aaKnown RBP15.21■□□□□ 0.03
CCS-203ENST00000526058 COQ10BQ9H8M1 238 aa15.21■□□□□ 0.03
CCS-203ENST00000526058 TPT1P8Q9HAU6 139 aa15.21■□□□□ 0.03
CCS-203ENST00000526058 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.21■□□□□ 0.03
CCS-203ENST00000526058 PROCRQ9UNN8 238 aa15.21■□□□□ 0.03
CCS-203ENST00000526058 SLC35A3Q9Y2D2 325 aa15.21■□□□□ 0.03
CCS-203ENST00000526058 HIVEP1P15822 2718 aa15.21■□□□□ 0.02
CCS-203ENST00000526058 FREM1Q5H8C1 2179 aa15.2■□□□□ 0.02
CCS-203ENST00000526058 A0A1W2PNR3 127 aa15.2■□□□□ 0.02
CCS-203ENST00000526058 GJE1A6NN92 205 aa15.2■□□□□ 0.02
CCS-203ENST00000526058 ADAM11O75078 769 aa15.2■□□□□ 0.02
CCS-203ENST00000526058 SS18L1O75177 396 aaPredicted RBP15.2■□□□□ 0.02
CCS-203ENST00000526058 PLGP00747 810 aaPredicted RBP15.2■□□□□ 0.02
CCS-203ENST00000526058 NR2F1P10589 423 aa15.2■□□□□ 0.02
CCS-203ENST00000526058 CD8BP10966 210 aa15.2■□□□□ 0.02
CCS-203ENST00000526058 CD1EP15812 388 aa15.2■□□□□ 0.02
CCS-203ENST00000526058 PGCP20142 388 aa15.2■□□□□ 0.02
CCS-203ENST00000526058 RYKP34925 604 aa15.2■□□□□ 0.02
CCS-203ENST00000526058 CD79BP40259 229 aa15.2■□□□□ 0.02
CCS-203ENST00000526058 CRATP43155 626 aa15.2■□□□□ 0.02
CCS-203ENST00000526058 STX1BP61266 288 aa15.2■□□□□ 0.02
CCS-203ENST00000526058 SELENBP1Q13228 472 aa15.2■□□□□ 0.02
CCS-203ENST00000526058 ZNF239Q16600 458 aaKnown RBP15.2■□□□□ 0.02
CCS-203ENST00000526058 LSRQ86X29 649 aaPredicted RBP15.2■□□□□ 0.02
CCS-203ENST00000526058 ST8SIA1Q92185 356 aa15.2■□□□□ 0.02
CCS-203ENST00000526058 CNOT9Q92600 299 aaKnown RBP15.2■□□□□ 0.02
CCS-203ENST00000526058 THOC1Q96FV9 657 aaKnown RBP15.2■□□□□ 0.02
CCS-203ENST00000526058 PAIP1Q9H074 479 aaKnown RBP15.2■□□□□ 0.02
CCS-203ENST00000526058 CLEC4MQ9H2X3 399 aaPredicted RBP15.2■□□□□ 0.02
CCS-203ENST00000526058 LIME1Q9H400 295 aa15.2■□□□□ 0.02
CCS-203ENST00000526058 MTHFD2LQ9H903 347 aaPredicted RBP15.2■□□□□ 0.02
CCS-203ENST00000526058 PCDHB14Q9Y5E9 798 aa15.2■□□□□ 0.02
CCS-203ENST00000526058 SH3D21A4FU49 640 aa15.19■□□□□ 0.02
CCS-203ENST00000526058 AGAP5A6NIR3 686 aa15.19■□□□□ 0.02
CCS-203ENST00000526058 KCNJ5P48544 419 aa15.19■□□□□ 0.02
CCS-203ENST00000526058 CTBP2P56545 445 aa15.19■□□□□ 0.02
CCS-203ENST00000526058 MERTKQ12866 999 aa15.19■□□□□ 0.02
CCS-203ENST00000526058 BLOC1S3Q6QNY0 202 aa15.19■□□□□ 0.02
CCS-203ENST00000526058 PLEKHM3Q6ZWE6 761 aa15.19■□□□□ 0.02
CCS-203ENST00000526058 OR6K3Q8NGY3 331 aa15.19■□□□□ 0.02
CCS-203ENST00000526058 ZNF563Q8TA94 476 aa15.19■□□□□ 0.02
CCS-203ENST00000526058 ABHD3Q8WU67 409 aa15.19■□□□□ 0.02
CCS-203ENST00000526058 CPNE4Q96A23 557 aaPredicted RBP15.19■□□□□ 0.02
CCS-203ENST00000526058 DACH2Q96NX9 599 aa15.19■□□□□ 0.02
CCS-203ENST00000526058 TIGARQ9NQ88 270 aa15.19■□□□□ 0.02
CCS-203ENST00000526058 PLSCR4Q9NRQ2 329 aa15.19■□□□□ 0.02
CCS-203ENST00000526058 ACER3Q9NUN7 267 aa15.19■□□□□ 0.02
CCS-203ENST00000526058 CCDC167Q9P0B6 97 aa15.19■□□□□ 0.02
CCS-203ENST00000526058 EMC9Q9Y3B6 208 aa15.19■□□□□ 0.02
CCS-203ENST00000526058 IGHV3-15A0A0B4J1V0 119 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 TFPTP0C1Z6 253 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 POU2F1P14859 743 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 HOXB9P17482 250 aaPredicted RBP15.18■□□□□ 0.02
CCS-203ENST00000526058 RPS4Y1P22090 263 aaKnown RBP15.18■□□□□ 0.02
CCS-203ENST00000526058 CCKARP32238 428 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 DSTNP60981 165 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 EXOC3L2Q2M3D2 409 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 CDC20BQ86Y33 519 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 ARFGAP2Q8N6H7 521 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 RNF128Q8TEB7 428 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 WDR60Q8WVS4 1066 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 TMEM234Q8WY98 164 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 REXO5Q96IC2 774 aaKnown RBP15.18■□□□□ 0.02
CCS-203ENST00000526058 WFIKKN1Q96NZ8 548 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 SLC39A3Q9BRY0 314 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 SLC52A3Q9NQ40 469 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 EXOSC3Q9NQT5 275 aaKnown RBP15.18■□□□□ 0.02
CCS-203ENST00000526058 CTPS2Q9NRF8 586 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 GLRX2Q9NS18 164 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 ELOVL5Q9NYP7 299 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 SLAMF8Q9P0V8 285 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 P2RX2Q9UBL9 471 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 F8P00451 2351 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 ITPR3Q14573 2671 aa15.18■□□□□ 0.02
CCS-203ENST00000526058 NR5A2O00482 541 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 AP3D1O14617 1153 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 BCHEP06276 602 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 NUDT7P0C024 238 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 IL7RP16871 459 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 KLK2P20151 261 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 ENPP1P22413 925 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 AGTR1P30556 359 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 SLC7A1P30825 629 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 DNAJA1P31689 397 aaKnown RBP15.17■□□□□ 0.02
CCS-203ENST00000526058 UGT2B10P36537 528 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 MAGEA8P43361 318 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 IDH2P48735 452 aaKnown RBP15.17■□□□□ 0.02
CCS-203ENST00000526058 PCYT1AP49585 367 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 POU4F3Q15319 338 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 RPS26P11Q5JNZ5 115 aaPredicted RBP15.17■□□□□ 0.02
CCS-203ENST00000526058 PAGE3Q5JUK9 113 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 GTF2IRD2BQ6EKJ0 949 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 C3orf33Q6P1S2 294 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 FCRLAQ7L513 359 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 GTF2IRD2Q86UP8 949 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 VRK2Q86Y07 508 aa15.17■□□□□ 0.02
CCS-203ENST00000526058 CMIPQ8IY22 773 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms