RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 GUCY1B2O75343 617 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 SOX30O94993 753 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 SEMA3DO95025 777 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 TNFSF15O95150 251 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 GBAP04062 536 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 KLK3P07288 261 aaPredicted RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 ACAA1P09110 424 aaPredicted RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 ANXA4P09525 319 aaPredicted RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 FAM58BPP0C7Q3 252 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 PRPS2P11908 318 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 ITIH1P19827 911 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 NCF2P19878 526 aaPredicted RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 HIST1H1TP22492 207 aaPredicted RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 ATP5A1P25705 553 aaKnown RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 RBMS1P29558 406 aaKnown RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 BSGP35613 385 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 ETV5P41161 510 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 SSR2P43308 183 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 NUDT6P53370 316 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 MTTPP55157 894 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 TRA2BP62995 288 aaKnown RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 ERVK-8P63133 956 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 RPL38P63173 70 aaKnown RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.12□□□□□ -1.75
USP48-211ENST00000526044 C2orf80Q0P641 193 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 HNF4GQ14541 408 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 ADIPOQQ15848 244 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 GSTA3Q16772 222 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 DEFB134Q4QY38 66 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 XKR7Q5GH72 579 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 C1orf189Q5VU69 101 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 IL23RQ5VWK5 629 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 CGB2Q6NT52 195 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 PWWP2BQ6NUJ5 590 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 PRMT9Q6P2P2 845 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 WDR73Q6P4I2 378 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 DGLUCYQ7Z3D6 616 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 PIWIL3Q7Z3Z3 882 aaKnown RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 PXKQ7Z7A4 578 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 ZER1Q7Z7L7 766 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 GPR180Q86V85 440 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 NUDT13Q86X67 352 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 FAM9CQ8IZT9 166 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 DSELQ8IZU8 1212 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 AMER3Q8N944 861 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 ACOT4Q8N9L9 421 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 OR9A4Q8NGU2 314 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 OR51Q1Q8NH59 317 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 ZCCHC10Q8TBK6 192 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 C16orf78Q8WTQ4 265 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 NEUROG1Q92886 237 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 PTP4A1Q93096 173 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 TM4SF18Q96CE8 201 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 FAM120BQ96EK7 910 aaKnown RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 MMABQ96EY8 250 aaPredicted RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 DACH2Q96NX9 599 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 OR52B2Q96RD2 323 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 EBF4Q9BQW3 602 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 DDA1Q9BW61 102 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 MRPL1Q9BYD6 325 aaKnown RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 AICDAQ9GZX7 198 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 POLR1BQ9H9Y6 1135 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 APMAPQ9HDC9 416 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 MS4A12Q9NXJ0 267 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 SELENONQ9NZV5 590 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 DHCR7Q9UBM7 475 aaKnown RBP4.12□□□□□ -1.75
USP48-211ENST00000526044 PISDQ9UG56 409 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 BAIAP2L1Q9UHR4 511 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 LAMP5Q9UJQ1 280 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 PADI1Q9ULC6 663 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 TMEM5Q9Y2B1 443 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 ARL2BPQ9Y2Y0 163 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 TMED5Q9Y3A6 229 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 SPACA6W5XKT8 324 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 CROCCQ5TZA2 2017 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 KIF26BQ2KJY2 2108 aa4.12□□□□□ -1.75
USP48-211ENST00000526044 CCDC88CQ9P219 2028 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 A0A0A6YYD5 115 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 A0A1B0GX78 115 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 A0A1W2PNU3 283 aaPredicted RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 C1orf226A1L170 272 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 TRABD2BA6NFA1 517 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 E9PBE3 544 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 PSMD12O00232 456 aaPredicted RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 CLDN4O14493 209 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 NVLO15381 856 aaKnown RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 CHST10O43529 356 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 SLC28A2O43868 658 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 PCDH7O60245 1069 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 KLHL41O60662 606 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 DNAJB6O75190 326 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 EEDO75530 441 aaKnown RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 STK17BO94768 372 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 KIAA0754O94854 1291 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 NSA2O95478 260 aaKnown RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 SCGB1D1O95968 90 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 PRSS2P07478 247 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 SNRNP70P08621 437 aaKnown RBP4.11□□□□□ -1.75
USP48-211ENST00000526044 G6PDP11413 515 aa4.11□□□□□ -1.75
USP48-211ENST00000526044 BCKDHAP12694 445 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms