RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 MAB21L3Q8N8X9 362 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 SYT14Q8NB59 555 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 NOA1Q8NC60 698 aaKnown RBP4.18□□□□□ -1.74
CD44-220ENST00000525688 OR5T3Q8NGG3 340 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 OR10Q1Q8NGQ4 319 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 MARCH1Q8TCQ1 289 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 FAM151AQ8WW52 585 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 NRGNQ92686 78 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 ASB9Q96DX5 294 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 CERS2Q96G23 380 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 MAP3K3Q99759 626 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 TMEM246Q9BRR3 403 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 PELOQ9BRX2 385 aaKnown RBP4.18□□□□□ -1.74
CD44-220ENST00000525688 C20orf24Q9BUV8 137 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 ST6GALNAC5Q9BVH7 336 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 TEKT3Q9BXF9 490 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 TSGA10Q9BZW7 698 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 ROGDIQ9GZN7 287 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 MCCC2Q9HCC0 563 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 NT5MQ9NPB1 228 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 TXLNGQ9NUQ3 528 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 MED17Q9NVC6 651 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 RBAKQ9NYW8 714 aaPredicted RBP4.18□□□□□ -1.74
CD44-220ENST00000525688 DCDC2Q9UHG0 476 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 BCAP29Q9UHQ4 241 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 STUB1Q9UNE7 303 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 RBMX2Q9Y388 322 aaKnown RBP4.18□□□□□ -1.74
CD44-220ENST00000525688 NPTNQ9Y639 398 aa4.18□□□□□ -1.74
CD44-220ENST00000525688 MYH2Q9UKX2 1941 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 IGLV9-49A0A0B4J1Y8 123 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 A0A1B0GVL5 298 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 SERPINE3A8MV23 424 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 A8MXQ7 604 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 C2CD4DB7Z1M9 353 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 TMEM150CB9EJG8 249 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 CLDN5O00501 218 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 ITGB1BP1O14713 200 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 GPAA1O43292 621 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 SCO2O43819 266 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 SCN2BO60939 215 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 BAG3O95817 575 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 APOHP02749 345 aaPredicted RBP4.17□□□□□ -1.74
CD44-220ENST00000525688 NR3C1P04150 777 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 PNMA6AP0CW24 399 aaPredicted RBP4.17□□□□□ -1.74
CD44-220ENST00000525688 MARK3P27448 753 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 BTDP43251 543 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 GLIPR1P48060 266 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 SLC7A2P52569 658 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 POLR2GP62487 172 aaKnown RBP eCLIP4.17□□□□□ -1.74
CD44-220ENST00000525688 PAX5Q02548 391 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 SLC3A1Q07837 685 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 IL10RBQ08334 325 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 BST2Q10589 180 aaKnown RBP4.17□□□□□ -1.74
CD44-220ENST00000525688 TCP10Q12799 353 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 FHL1Q13642 323 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 TAF13Q15543 124 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 RBBP7Q16576 425 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 ZSWIM7Q19AV6 140 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 C18orf21Q32NC0 220 aaPredicted RBP4.17□□□□□ -1.74
CD44-220ENST00000525688 SBK1Q52WX2 424 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 TECRLQ5HYJ1 363 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 TMEM31Q5JXX7 168 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 SLC35D3Q5M8T2 416 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 CDKL4Q5MAI5 379 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 LIPNQ5VXI9 398 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 LIPKQ5VXJ0 399 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 CAPN13Q6MZZ7 669 aaPredicted RBP4.17□□□□□ -1.74
CD44-220ENST00000525688 RHBDD2Q6NTF9 364 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 ZNF771Q7L3S4 317 aaPredicted RBP4.17□□□□□ -1.74
CD44-220ENST00000525688 NLRP9Q7RTR0 991 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 SNX20Q7Z614 316 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 TMEM123Q8N131 208 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 GABRG1Q8N1C3 465 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 FBXL16Q8N461 479 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 C17orf78Q8N4C9 275 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 PROKR2Q8NFJ6 384 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 DMBX1Q8NFW5 382 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 FANK1Q8TC84 345 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 RPL3LQ92901 407 aaKnown RBP4.17□□□□□ -1.74
CD44-220ENST00000525688 GLYATL1Q969I3 302 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 ADIPOR1Q96A54 375 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 RAB39BQ96DA2 213 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 PPP1R16AQ96I34 528 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 HPDLQ96IR7 371 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 PLEKHA8Q96JA3 519 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 ZNF514Q96K75 400 aaPredicted RBP4.17□□□□□ -1.74
CD44-220ENST00000525688 VSTM2LQ96N03 204 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 TSSK2Q96PF2 358 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 PRMT1Q99873 361 aaKnown RBP4.17□□□□□ -1.74
CD44-220ENST00000525688 CNPY3Q9BT09 278 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 TRMT61BQ9BVS5 477 aaKnown RBP4.17□□□□□ -1.74
CD44-220ENST00000525688 HINT2Q9BX68 163 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 NLNQ9BYT8 704 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 TM6SF2Q9BZW4 377 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 OPN3Q9H1Y3 402 aaPredicted RBP4.17□□□□□ -1.74
CD44-220ENST00000525688 OR2AG1Q9H205 316 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 CPVLQ9H3G5 476 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 GOLPH3Q9H4A6 298 aa4.17□□□□□ -1.74
CD44-220ENST00000525688 DMAP1Q9NPF5 467 aaPredicted RBP4.17□□□□□ -1.74
CD44-220ENST00000525688 ECHDC1Q9NTX5 307 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms